Gene
| Gene Model ID | pfu_aug2.0_139.1_30286 |
|---|---|
| Locus | scaffold139.1 : 445106 ... 476728 : - |
| To GenomeBrowser | scaffold139.1:445106..476728 |
| Genes list of scaffold | scaffold139.1 |
| Synonym | pfu_aug1.0_666.1_36639 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_139.1_30286.t1 | 6 | 1 | WD40 | 48 | 78 | 1.5e-35 | 119.7 | 8.6e-11 | 1.2e-07 | 31.3 |
| pfu_aug2.0_139.1_30286.t1 | 6 | 2 | WD40 | 91 | 129 | 1.5e-35 | 119.7 | 3.2e-09 | 4.3e-06 | 26.4 |
| pfu_aug2.0_139.1_30286.t1 | 6 | 3 | WD40 | 144 | 170 | 1.5e-35 | 119.7 | 0.0019 | 2.6 | 8.0 |
| pfu_aug2.0_139.1_30286.t1 | 6 | 4 | WD40 | 230 | 260 | 1.5e-35 | 119.7 | 8.6e-11 | 1.2e-07 | 31.3 |
| pfu_aug2.0_139.1_30286.t1 | 6 | 5 | WD40 | 273 | 311 | 1.5e-35 | 119.7 | 3.2e-09 | 4.3e-06 | 26.4 |
| pfu_aug2.0_139.1_30286.t1 | 6 | 6 | WD40 | 326 | 352 | 1.5e-35 | 119.7 | 0.0019 | 2.6 | 8.0 |
| pfu_aug2.0_139.1_30286.t1 | 1 | 1 | DUF1900 | 406 | 540 | 0.0 | 175.7 | 0.0 | 0.0 | 174.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_139.1_30286.t1 | gi|524915110|ref|XP_005112361.1| | PREDICTED: coronin-1C-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_139.1_30286.t1 | gi|524915112|ref|XP_005112362.1| | PREDICTED: coronin-1C-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_139.1_30286.t1 | gi|675884642|ref|XP_009027823.1| | hypothetical protein HELRODRAFT_115162 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_139.1_30286.t1 | gi|170032077|ref|XP_001843909.1| | coronin [Culex quinquefasciatus] | 0.0 |
| pfu_aug2.0_139.1_30286.t1 | gi|675884664|ref|XP_009027834.1| | hypothetical protein HELRODRAFT_115173 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_139.1_30286.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30286.t1 gatgtgttacatgtagtgtgtatgtgcgtttggattttcttgtgaacagcaaagaagccaaaacaatcatcaaagaaaca tcaaaccttgcacaaatgttccctatgtgtggacgtgtggagagagatgcaccattagtggctggtcataaggccgccgt gttagacttagcatggtgtcctcacaacgatgatgtcatagctagcgcctcagaggactgcacggtgagggtgtggcaga tcccagagggagggttagtcactaacctgacggagtgtatagtagtgttacaggcacatcagaggagagtcgggctcgta atatggcatccatcagcacaaaatatcctactcagtgcaggttcggacaacaaaattttcatttggaatgtcgggacagg agaagcttacgttgaaatagaggttcccgatgtgatccactctgtttctttcaatcttaatggttgcaaattcgtttgta catgtaaagacaaaattatgagggttattgatgccagaagtgggaatgtactaacggagggaaaaacacatcagggttct aaaccaagtcaagctgtgtaccttaaagacggtcgtatcttcaccacgggtttctctaggatgagtgaaagacagtacgg gttatggaacgaatgtgggcgtgtggagagagatgcaccattagtggctggtcataaggccgccgtgttagacttagcat ggtgtcctcacaacgatgacgtcatagctagcgcgtcagaggactgcacggtgagggtgtggcagatcccagagggaggg ttagtcactaacctgacggagtgtatagtagtgttacaggcacatcagaggagagtcgggctcgtaatatggcatccgtc agcacaaaatatcctactcagtgcaggttcggacaacaaaattttcatttggaatgtcgggacaggagaagcttacgttg aaatagaggttcccgatgtgatccactctgtttctttcaatcttaatggttgcaaattcgtttgtacatgtaaagacaaa atcatgagggttattgatgccagaagtggtaatgtactaacggagggaaaaacacatcagggttctaaaccaagtcaagc tgtgtaccttaaagacggtcgtatcttcaccacgggtttctctaggatgagtgaaagacagtacgggttatggaacgaaa atgacttcagtaaagctctatgtatggaggacattgaccagagtaatggagtgatgttcccattctatgatcctgataca agtatggtttatttactcggcaagggtgacagcgtgatacgctttttcgaagtgacaaatgaggagccttatgtacatta cttgaatctgtatcaatcaaaagaagcaatgagaggattcgggtttatgccaaaacgtggagtgaatgtcaacatctgtg aaatagataggatatacaagttacacaacaatggactgtgtgaagttataccatttacagtgccaagaaagtctgagctg ttccaagaggacctttatccagacactgctgcagatgctgcggccataagtggagaagattggataaatggtacagatgc tgaaccttgcaagatctcactaaagcagggatttgtttcctccggcccagagccaacagctgtcaggaagtcaaatatat tggataaaaaagtaatcggcactcctgctcgccccgctgtcgataaacccaaacctgtggcagcaacacccgctccagcg gcccagccagcagcagcggctacaccagctccggcggctacaccggctccagccacctcaggcgtagaactgccaccgaa tgatgctaatgagttaaagtcagaaatagcccagctaaagaagaggattgatgggcaggataaaatcatcgcaaagctcg agaaaagattggctgctctagaggggggcatcgaagacatggtggacgatgaggaaaattaa |
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Protein
| Protein ID | pfu_aug2.0_139.1_30286.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_139.1_30286.t1 CVTCSVYVRLDFLVNSKEAKTIIKETSNLAQMFPMCGRVERDAPLVAGHKAAVLDLAWCPHNDDVIASASEDCTVRVWQI PEGGLVTNLTECIVVLQAHQRRVGLVIWHPSAQNILLSAGSDNKIFIWNVGTGEAYVEIEVPDVIHSVSFNLNGCKFVCT CKDKIMRVIDARSGNVLTEGKTHQGSKPSQAVYLKDGRIFTTGFSRMSERQYGLWNECGRVERDAPLVAGHKAAVLDLAW CPHNDDVIASASEDCTVRVWQIPEGGLVTNLTECIVVLQAHQRRVGLVIWHPSAQNILLSAGSDNKIFIWNVGTGEAYVE IEVPDVIHSVSFNLNGCKFVCTCKDKIMRVIDARSGNVLTEGKTHQGSKPSQAVYLKDGRIFTTGFSRMSERQYGLWNEN DFSKALCMEDIDQSNGVMFPFYDPDTSMVYLLGKGDSVIRFFEVTNEEPYVHYLNLYQSKEAMRGFGFMPKRGVNVNICE IDRIYKLHNNGLCEVIPFTVPRKSELFQEDLYPDTAADAAAISGEDWINGTDAEPCKISLKQGFVSSGPEPTAVRKSNIL DKKVIGTPARPAVDKPKPVAATPAPAAQPAAAATPAPAATPAPATSGVELPPNDANELKSEIAQLKKRIDGQDKIIAKLE KRLAALEGGIEDMVDDEEN |
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