Gene
| Gene Model ID | pfu_aug2.0_1391.1_05013 |
|---|---|
| Locus | scaffold1391.1 : 150726 ... 157866 : + |
| To GenomeBrowser | scaffold1391.1:150726..157866 |
| Genes list of scaffold | scaffold1391.1 |
| Synonym | pfu_aug1.0_3089.1_23175 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1391.1_05013.t1 | 2 | 1 | LRR_8 | 576 | 633 | 6.3e-14 | 51.4 | 6.5e-12 | 1.6e-08 | 34.1 |
| pfu_aug2.0_1391.1_05013.t1 | 3 | 1 | LRR_4 | 576 | 613 | 5.4e-13 | 48.2 | 6.2e-09 | 1.5e-05 | 24.4 |
| pfu_aug2.0_1391.1_05013.t1 | 5 | 1 | LRR_1 | 577 | 595 | 4.3e-08 | 32.1 | 0.22 | 550.0 | 1.3 |
| pfu_aug2.0_1391.1_05013.t1 | 5 | 2 | LRR_1 | 600 | 620 | 4.3e-08 | 32.1 | 0.0003 | 0.74 | 10.0 |
| pfu_aug2.0_1391.1_05013.t1 | 3 | 2 | LRR_4 | 602 | 646 | 5.4e-13 | 48.2 | 1.4e-08 | 3.4e-05 | 23.3 |
| pfu_aug2.0_1391.1_05013.t1 | 5 | 3 | LRR_1 | 622 | 635 | 4.3e-08 | 32.1 | 0.0016 | 3.9 | 7.8 |
| pfu_aug2.0_1391.1_05013.t1 | 2 | 2 | LRR_8 | 645 | 680 | 6.3e-14 | 51.4 | 1.3e-07 | 0.00031 | 20.4 |
| pfu_aug2.0_1391.1_05013.t1 | 3 | 3 | LRR_4 | 646 | 679 | 5.4e-13 | 48.2 | 5.5e-07 | 0.0014 | 18.2 |
| pfu_aug2.0_1391.1_05013.t1 | 5 | 4 | LRR_1 | 646 | 664 | 4.3e-08 | 32.1 | 0.0017 | 4.1 | 7.8 |
| pfu_aug2.0_1391.1_05013.t1 | 5 | 5 | LRR_1 | 668 | 686 | 4.3e-08 | 32.1 | 0.027 | 66.0 | 4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1391.1_05013.t1 | gi|585683275|ref|XP_006812394.1| | PREDICTED: leucine-rich repeat protein soc-2 homolog [Saccoglossus kowalevskii] | 4.0e-21 |
| pfu_aug2.0_1391.1_05013.t1 | gi|676433080|ref|XP_009046783.1| | hypothetical protein LOTGIDRAFT_91086, partial [Lottia gigantea] | 7.0e-21 |
| pfu_aug2.0_1391.1_05013.t1 | gi|669288587|ref|XP_008637194.1| | PREDICTED: repetin [Corvus brachyrhynchos] | 4.0e-20 |
| pfu_aug2.0_1391.1_05013.t1 | gi|524877424|ref|XP_005095414.1| | PREDICTED: protein lap1-like isoform X1 [Aplysia californica] | 7.0e-19 |
| pfu_aug2.0_1391.1_05013.t1 | gi|156389211|ref|XP_001634885.1| | predicted protein [Nematostella vectensis] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_1391.1_05013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1391.1_05013.t1 atgaattctgttataggaagcatagtatttgtgattctgctaaacagcaggacattcttacactacccggtactaggtgt caccaggacattcttactctatccggtactaggtgtcacatggacattcttactctatccgtcacttggtgtcacaagga cattcttactctacccggtactaggtgtcaccaggacattcttactctacccggacattcttactctacccggtacttgc tgtcaccagaccttcttactctaccaggtactaggtgtcaccaggaccttcttactctaccaggtacttgctgtcaccag accttcttactctacccggtacttgatgtcacaaggacattcttactgtacccggtactggatgtcaccaggacattctt attctaccaggacattcttactctacccgatacttgatgtccccaggatattcttactttacccggtacttggtgtcaca aggatattcttactctacccagtacttggtgtcaacaggactttcttactatacccggtacttgatgtcaccaggacatt cgtaccctacccagtacttgatgtcaccatacattattaccctacccagtacttgatgtcaccaggacattcttacccta accagtgcttaatgtcaccaggacattcttactctacccggtacttgatgtcaccaggacattattactgtacccggtac tggatgtcaacaggacattcttactctaccaggtacttgatgtcaccaggacattcttactgtactcggtactggatgtc accaggacattcttactctacccactacttgatgtcaccaggacattcttattttacccggtacttgatgtccccaggtc attcaaactctattcggtactggatgtcaccaggacattactactctacccggtacttcatgtcaccaggacattcttac cctacccggtacttgatgtcaccagggcattcttactctacccggtatttgatgtcaccagaccctcttactctacccgg tactggatgtcaccaggacattattactctaccaggtacttgctgtcaccagaccttcttactctaccaggtacttgatg tcaccaggatattcttactctacccggtacttgatgtcaccaggacattcttactctacccggtacttgatgtcaccagg acattcttactgtacccggtactggatgtcaccatgacattcttactctacccggtacttgatgtcacgaggacattctc actctatccggtacttgatgtcaccaggatattcttactctacccggtacttgatgtcacaaggacagtcttactctatt cggtccttgatgtcaccaggacattattactctaccaggtacttgctgtcaccaggaccttcttactctacccagtactt gatgtcaccaggacattcttaccctacccagtacatgatgtcaccaggacattcttaccctacccagtacttaatgtcac caggacattcttactctacccggtacttgatgtcacaaggacattcttactctattcgatgtcgttatgggagggttttt caagactgttttctaagcaagacagatatggcaatgggaaaatgaaatctaagacagaatatgagagtgtccaagattat caggagacttatttggatgatttttttctatcactgaaagtagcaaaaatacaaagtttgcaaataaatgacacaaaaat aactcggctaccagcgtctttgggcaggtttacactcctctcagaattagatctttcacgaaacgctcttcggtgcttgc ccgatgaaatgaaaaatctagcaaagctggaaattcttaacctttcccacaataagtttttaatctttcccatcgtggta accaaaatttctgcgttgaaatcgctggatctgagtataaattatataacagttttaccctccgctatgcttaaacttac acagttatcgacgctgagcctagagggaaatgaaatcaaattaccaatacccgagtgcgaaaagcgaacaatagaagaaa tatttgaagctttcaaattcggaggcaaagagagcgaacgacgcaacttgtggggcagttggagaccatattatgatgag gcggcacaatgcagtgttaagagactgaccgatttgagtacggactgcattctttctaatgagatagactatcaatccgg aaaccatgtacctccagcagtgaaaacttacttgaccgccacatttaacctatacccgaatctaatgaagtgtagtgtgt gtaagaagtactttactaccagacatatttttattcatcatgcatgttataaaactatatattga |
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Protein
| Protein ID | pfu_aug2.0_1391.1_05013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1391.1_05013.t1 MNSVIGSIVFVILLNSRTFLHYPVLGVTRTFLLYPVLGVTWTFLLYPSLGVTRTFLLYPVLGVTRTFLLYPDILTLPGTC CHQTFLLYQVLGVTRTFLLYQVLAVTRPSYSTRYLMSQGHSYCTRYWMSPGHSYSTRTFLLYPILDVPRIFLLYPVLGVT RIFLLYPVLGVNRTFLLYPVLDVTRTFVPYPVLDVTIHYYPTQYLMSPGHSYPNQCLMSPGHSYSTRYLMSPGHYYCTRY WMSTGHSYSTRYLMSPGHSYCTRYWMSPGHSYSTHYLMSPGHSYFTRYLMSPGHSNSIRYWMSPGHYYSTRYFMSPGHSY PTRYLMSPGHSYSTRYLMSPDPLTLPGTGCHQDIITLPGTCCHQTFLLYQVLDVTRIFLLYPVLDVTRTFLLYPVLDVTR TFLLYPVLDVTMTFLLYPVLDVTRTFSLYPVLDVTRIFLLYPVLDVTRTVLLYSVLDVTRTLLLYQVLAVTRTFLLYPVL DVTRTFLPYPVHDVTRTFLPYPVLNVTRTFLLYPVLDVTRTFLLYSMSLWEGFSRLFSKQDRYGNGKMKSKTEYESVQDY QETYLDDFFLSLKVAKIQSLQINDTKITRLPASLGRFTLLSELDLSRNALRCLPDEMKNLAKLEILNLSHNKFLIFPIVV TKISALKSLDLSINYITVLPSAMLKLTQLSTLSLEGNEIKLPIPECEKRTIEEIFEAFKFGGKESERRNLWGSWRPYYDE AAQCSVKRLTDLSTDCILSNEIDYQSGNHVPPAVKTYLTATFNLYPNLMKCSVCKKYFTTRHIFIHHACYKTIY |
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