Gene
| Gene Model ID | pfu_aug2.0_1394.1_15009 |
|---|---|
| Locus | scaffold1394.1 : 39996 ... 52452 : + |
| To GenomeBrowser | scaffold1394.1:39996..52452 |
| Genes list of scaffold | scaffold1394.1 |
| Synonym | pfu_aug1.0_29780.1_55316 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1394.1_15009.t1 | 2 | 1 | FAM177 | 22 | 128 | 1.5e-34 | 118.5 | 2.0e-38 | 2.9e-34 | 117.6 |
| pfu_aug2.0_1394.1_15009.t1 | 2 | 2 | FAM177 | 147 | 159 | 1.5e-34 | 118.5 | 0.39 | 5800.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1394.1_15009.t1 | gi|676431874|ref|XP_009046392.1| | hypothetical protein LOTGIDRAFT_212450 [Lottia gigantea] | 2.0e-38 |
| pfu_aug2.0_1394.1_15009.t1 | gi|586452992|ref|XP_006835413.1| | PREDICTED: protein FAM177A1 [Chrysochloris asiatica] | 7.0e-31 |
| pfu_aug2.0_1394.1_15009.t1 | gi|585668901|ref|XP_002735602.2| | PREDICTED: protein FAM177A1-like [Saccoglossus kowalevskii] | 1.0e-30 |
| pfu_aug2.0_1394.1_15009.t1 | gi|558137283|ref|XP_006117743.1| | PREDICTED: protein FAM177A1 [Pelodiscus sinensis] | 7.0e-30 |
| pfu_aug2.0_1394.1_15009.t1 | gi|543350481|ref|XP_005520354.1| | PREDICTED: protein FAM177A1 [Pseudopodoces humilis] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_1394.1_15009.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1394.1_15009.t1 atgtgtagaataaatatacgaccagaaacattcaagaattctgacttcacgaacattcctttagagggtgacactacaca gaaaaagaagaaagtaccacggaggataatacactgtagtgatggtatcctcgaggaatattctactgatgaggaagagg acaaacctccccctcctcctccagtaaatcctagagacttaacatggttgccatggttttggtattacttggttacaatg gccagaggcactttgtctgttgcagacacttgtggtgaaaaattagcatggttctttggaatcacgtcccctaaatacca gtatgctatagatgagtactacaggttgaaagctgaggaggaaaaagagaaagcagaagaagctagaagattagaagttt tggaggagaggaaattatctcaggtcaaagttcaaacctctgaacctgacccaaataaagacgaccaaacgaacaatgat gagacaactagattttag |
|
Protein
| Protein ID | pfu_aug2.0_1394.1_15009.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1394.1_15009.t1 MCRINIRPETFKNSDFTNIPLEGDTTQKKKKVPRRIIHCSDGILEEYSTDEEEDKPPPPPPVNPRDLTWLPWFWYYLVTM ARGTLSVADTCGEKLAWFFGITSPKYQYAIDEYYRLKAEEEKEKAEEARRLEVLEERKLSQVKVQTSEPDPNKDDQTNND ETTRF |
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