Gene
| Gene Model ID | pfu_aug2.0_1394.1_15010 |
|---|---|
| Locus | scaffold1394.1 : 85356 ... 90184 : + |
| To GenomeBrowser | scaffold1394.1:85356..90184 |
| Genes list of scaffold | scaffold1394.1 |
| Synonym | pfu_aug1.0_5511.1_59785 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1394.1_15010.t1 | 2 | 1 | Ank_4 | 50 | 80 | 5.9e-19 | 68.0 | 4.8e-07 | 0.0014 | 19.0 |
| pfu_aug2.0_1394.1_15010.t1 | 1 | 1 | Ank_2 | 53 | 120 | 1.9e-17 | 63.3 | 9.0e-21 | 2.7e-17 | 62.9 |
| pfu_aug2.0_1394.1_15010.t1 | 2 | 1 | Ank_5 | 55 | 97 | 2.6e-20 | 71.9 | 3.2e-12 | 9.6e-09 | 35.2 |
| pfu_aug2.0_1394.1_15010.t1 | 2 | 2 | Ank_4 | 60 | 113 | 5.9e-19 | 68.0 | 4.6e-18 | 1.4e-14 | 54.1 |
| pfu_aug2.0_1394.1_15010.t1 | 3 | 1 | Ank | 60 | 90 | 8.5e-18 | 63.2 | 9.5e-12 | 2.8e-08 | 33.1 |
| pfu_aug2.0_1394.1_15010.t1 | 2 | 1 | Ank_3 | 60 | 87 | 1.1e-13 | 49.9 | 4.8e-09 | 1.4e-05 | 24.8 |
| pfu_aug2.0_1394.1_15010.t1 | 2 | 2 | Ank_5 | 79 | 132 | 2.6e-20 | 71.9 | 1.8e-14 | 5.3e-11 | 42.3 |
| pfu_aug2.0_1394.1_15010.t1 | 3 | 2 | Ank | 94 | 118 | 8.5e-18 | 63.2 | 2.2e-11 | 6.6e-08 | 31.9 |
| pfu_aug2.0_1394.1_15010.t1 | 2 | 2 | Ank_3 | 94 | 117 | 1.1e-13 | 49.9 | 1.8e-08 | 5.5e-05 | 23.0 |
| pfu_aug2.0_1394.1_15010.t1 | 3 | 3 | Ank | 152 | 160 | 8.5e-18 | 63.2 | 2.3 | 6900.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1394.1_15010.t1 | gi|32169294|emb|CAD90767.1| | Dysferlin-Interacting Protein 1 [Crassostrea gigas] | 0.0 |
| pfu_aug2.0_1394.1_15010.t1 | gi|676492014|ref|XP_009065784.1| | hypothetical protein LOTGIDRAFT_133274 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1394.1_15010.t1 | gi|573895650|ref|XP_006635570.1| | PREDICTED: protein phosphatase 1 regulatory subunit 27-like [Lepisosteus oculatus] | 2.0e-32 |
| pfu_aug2.0_1394.1_15010.t1 | gi|556955123|ref|XP_005989097.1| | PREDICTED: protein phosphatase 1 regulatory subunit 27 [Latimeria chalumnae] | 4.0e-31 |
| pfu_aug2.0_1394.1_15010.t1 | gi|524888412|ref|XP_005100777.1| | PREDICTED: protein phosphatase 1 regulatory subunit 12B-like [Aplysia californica] | 6.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_1394.1_15010.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1394.1_15010.t1 atgagccggagagcgagtgtgtacgcgaaacaaaatccggacaaaccgcgaccgaaagtgcgttttccggacgaactagt tttcttggacaatattaaagagaatgatattccggcacttgacggaatgttacggagagcgagtttacaagtggatatta gtggcattaatgacgcagggttgacacctttacatcaggcggtattagacggaaacaaaacggctgtacgtctgctcata ctacacggtgcagacgttaaccgacaggacgaggattcctggacacctctacatgccgcatgcgcagagggacacgctga tattgcaaaattattacttaaaaatggagccagaaaagaaatcctaacagaggacggagagcgccccctggatctcgtag aacctacagactttcccacaattagggtaatgttggggaaagtcccgctagatggcgcggatacggactcagcagacgat cttgatgacaatgactctagtagtcaaacgtga |
|
Protein
| Protein ID | pfu_aug2.0_1394.1_15010.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1394.1_15010.t1 MSRRASVYAKQNPDKPRPKVRFPDELVFLDNIKENDIPALDGMLRRASLQVDISGINDAGLTPLHQAVLDGNKTAVRLLI LHGADVNRQDEDSWTPLHAACAEGHADIAKLLLKNGARKEILTEDGERPLDLVEPTDFPTIRVMLGKVPLDGADTDSADD LDDNDSSSQT |
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