Gene
| Gene Model ID | pfu_aug2.0_1394.1_15011 |
|---|---|
| Locus | scaffold1394.1 : 99076 ... 104062 : + |
| To GenomeBrowser | scaffold1394.1:99076..104062 |
| Genes list of scaffold | scaffold1394.1 |
| Synonym | pfu_aug1.0_49721.1_20049 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1394.1_15011.t1 | 3 | 1 | Ank_4 | 49 | 80 | 3.0e-23 | 81.7 | 1.1e-08 | 3.3e-05 | 24.2 |
| pfu_aug2.0_1394.1_15011.t1 | 2 | 1 | Ank_5 | 50 | 98 | 2.3e-20 | 72.1 | 1.3e-13 | 4.0e-10 | 39.6 |
| pfu_aug2.0_1394.1_15011.t1 | 1 | 1 | Ank_2 | 51 | 120 | 5.0e-19 | 68.4 | 2.4e-22 | 7.3e-19 | 67.9 |
| pfu_aug2.0_1394.1_15011.t1 | 3 | 2 | Ank_4 | 60 | 113 | 3.0e-23 | 81.7 | 1.2e-18 | 3.6e-15 | 55.9 |
| pfu_aug2.0_1394.1_15011.t1 | 3 | 1 | Ank | 60 | 90 | 1.7e-19 | 68.5 | 3.8e-12 | 1.1e-08 | 34.4 |
| pfu_aug2.0_1394.1_15011.t1 | 2 | 1 | Ank_3 | 60 | 87 | 3.2e-14 | 51.6 | 3.1e-09 | 9.2e-06 | 25.4 |
| pfu_aug2.0_1394.1_15011.t1 | 2 | 2 | Ank_5 | 86 | 132 | 2.3e-20 | 72.1 | 4.8e-13 | 1.4e-09 | 37.8 |
| pfu_aug2.0_1394.1_15011.t1 | 3 | 2 | Ank | 94 | 121 | 1.7e-19 | 68.5 | 1.5e-12 | 4.3e-09 | 35.7 |
| pfu_aug2.0_1394.1_15011.t1 | 2 | 2 | Ank_3 | 94 | 118 | 3.2e-14 | 51.6 | 1.0e-08 | 3.0e-05 | 23.8 |
| pfu_aug2.0_1394.1_15011.t1 | 3 | 3 | Ank_4 | 97 | 132 | 3.0e-23 | 81.7 | 1.1e-05 | 0.033 | 14.7 |
| pfu_aug2.0_1394.1_15011.t1 | 3 | 3 | Ank | 152 | 160 | 1.7e-19 | 68.5 | 2.3 | 6900.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1394.1_15011.t1 | gi|543375081|ref|XP_005530753.1| | PREDICTED: protein phosphatase 1 regulatory subunit 27 [Pseudopodoces humilis] | 7.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_1394.1_15011.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1394.1_15011.t1 atgagcaggagagcgagtttgtacgcaaaacaaaatccggacaaacagcgaccgaaagtgcgttttccggatgaattagt tttcttggacaatatcaaagagaatgatattccggcacttcacggaatgttacgaagagctagtttacaagtggatatca atggaatcaatgacgcagggctgacaccgcttcatcaggcagtacttgacgggaatatcaccgcagtgcgcctgctcata cagcacggagcggaagtgaaccgacaggatgaagattcatggactcctcttcatgccgcatgcgcagaaggacacgccga tattgcgaagttgcttctgaaacatggagcaagtaaagaaatcctaacagaggacggagagcgccccctggatttagttg aacccacggactttcccacaatccgggtaatgctgggtaaagtcccgctagatggcgctgatacggactcagcagacgat ctcgacgaccatgacacgaacggacaggaataa |
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Protein
| Protein ID | pfu_aug2.0_1394.1_15011.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1394.1_15011.t1 MSRRASLYAKQNPDKQRPKVRFPDELVFLDNIKENDIPALHGMLRRASLQVDINGINDAGLTPLHQAVLDGNITAVRLLI QHGAEVNRQDEDSWTPLHAACAEGHADIAKLLLKHGASKEILTEDGERPLDLVEPTDFPTIRVMLGKVPLDGADTDSADD LDDHDTNGQE |
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