Gene
| Gene Model ID | pfu_aug2.0_1398.1_28266 |
|---|---|
| Locus | scaffold1398.1 : 144986 ... 155292 : + |
| To GenomeBrowser | scaffold1398.1:144986..155292 |
| Genes list of scaffold | scaffold1398.1 |
| Synonym | pfu_aug1.0_10002.1_10045 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1398.1_28266.t1 | 5 | 1 | LRR_6 | 200 | 211 | 1.9e-10 | 39.6 | 0.047 | 140.0 | 3.0 |
| pfu_aug2.0_1398.1_28266.t1 | 5 | 2 | LRR_6 | 228 | 247 | 1.9e-10 | 39.6 | 0.089 | 260.0 | 2.1 |
| pfu_aug2.0_1398.1_28266.t1 | 5 | 3 | LRR_6 | 266 | 284 | 1.9e-10 | 39.6 | 2.4e-05 | 0.07 | 13.2 |
| pfu_aug2.0_1398.1_28266.t1 | 5 | 4 | LRR_6 | 298 | 315 | 1.9e-10 | 39.6 | 0.0026 | 7.7 | 6.9 |
| pfu_aug2.0_1398.1_28266.t1 | 5 | 5 | LRR_6 | 321 | 336 | 1.9e-10 | 39.6 | 0.00053 | 1.6 | 9.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1398.1_28266.t1 | gi|742134995|ref|XP_010877369.1| | PREDICTED: leucine-rich repeat-containing protein 74A [Esox lucius] | 9.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_1398.1_28266.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1398.1_28266.t1 atggatgtccggttgcctcacctagcaccctcccctcatcttgacctggccccttctccgaccaagggactatactccag gaaagctacagttatctcccctatccacgaggattatgatgacgacaacataagtcacatgatcaacactcactcaagac gcaattcagagtcacgtggtcaacagatgtacaaagaaagggaaaagctcaaaagtcgagatgagtcaagaaatcaaaga tcgcgagcattgtctaggaatttatctagagcatcctttaaagcaccgacgcgaatggggaaccgatcaaaaacaaatgt tgaaactccaatttatgaattcgacccggaagcagattatgattttgattttgaaagcgatgaagatgaaacaccggcga acttcagcaacacaatagaagtttataagacaacctacctcagtaattgcaaaaagctgaaagtacggccatgctcaaaa gttctgctacaatttggtaaagagcacatgtccttctgtgggttaaatctcacaaagaaagagatgaaggctgtttttat taccattctagtctgcgatgattggaataatgttgatatagaaagtgtcgacatatcaaacaaccatttatcagtcaaag aaattgggtataccatagacatccttagggcaaataaaatcatacatacactggtgctgcaagattgtaaactatctggg aaaccgatcgaaatgctagcagactttctgaaaaagtcgacagttttacagtatctagatttaagttttgagaatgaaac tttgaaggaacttgaccttagctggaatcatataaggtcaaagggcgcggtgggcgtggctctcgggttaaagaaaaaca ttgccttactgaagctaagtctatcatggaatggattcggcttcgagggaagcgtcgctcttgcatgtgccttagcaacc aacacgaccctcactcatcttgacctcgcctgtaatcgtattcatccgcctgcattatttgaactcatcaaaggcctagc tacaaacaaatcactacgcgttctctgtgaattatattttgtctataaactctgcaccacattatcaatcagggagccca aggtagaagaatgttgtttacaaatgaatgaaatgtttccgggaacgtatggagagcttattgaaggtgaaagaaaactg aagaggaagataattgaggagaatgaggcagaaaggaagaggaattctcctatgaggacggacaaaaagacattttcaca atcatttagatcaacccccataaaaggcacaccaagagggacaccaactgccctgccaagactcaaataa |
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Protein
| Protein ID | pfu_aug2.0_1398.1_28266.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1398.1_28266.t1 MDVRLPHLAPSPHLDLAPSPTKGLYSRKATVISPIHEDYDDDNISHMINTHSRRNSESRGQQMYKEREKLKSRDESRNQR SRALSRNLSRASFKAPTRMGNRSKTNVETPIYEFDPEADYDFDFESDEDETPANFSNTIEVYKTTYLSNCKKLKVRPCSK VLLQFGKEHMSFCGLNLTKKEMKAVFITILVCDDWNNVDIESVDISNNHLSVKEIGYTIDILRANKIIHTLVLQDCKLSG KPIEMLADFLKKSTVLQYLDLSFENETLKELDLSWNHIRSKGAVGVALGLKKNIALLKLSLSWNGFGFEGSVALACALAT NTTLTHLDLACNRIHPPALFELIKGLATNKSLRVLCELYFVYKLCTTLSIREPKVEECCLQMNEMFPGTYGELIEGERKL KRKIIEENEAERKRNSPMRTDKKTFSQSFRSTPIKGTPRGTPTALPRLK |
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