Gene
| Gene Model ID | pfu_aug2.0_14.1_13371 |
|---|---|
| Locus | scaffold14.1 : 123114 ... 131795 : - |
| To GenomeBrowser | scaffold14.1:123114..131795 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_15470.1_39701 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13371.t2 | 2 | 1 | DUF4586 | 7 | 181 | 0.0 | 339.8 | 0.0 | 0.0 | 208.9 |
| pfu_aug2.0_14.1_13371.t2 | 2 | 2 | DUF4586 | 203 | 352 | 0.0 | 339.8 | 6.86636e-44 | 1.0e-39 | 136.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13371.t2 | gi|524866864|ref|XP_005090248.1| | PREDICTED: UPF0602 protein C4orf47 homolog isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13371.t1 atgggtgaaaaaggaggaaagacagacatggaccgtatcggtcttttccaggaaatgggttatgttacaataaatgacaa atacagacaaccaggaatccttcagttcaatgatgctgcttctaaaggcaaacagatggttccagaaggaacgaaagcca gatcagctctgcaagcaggatattttgatacaaagtttggaagagtatttgaaggagaatcgtatacagacccaataaag ctaagacgacaacatagactcaaagaaatgcagagaaatatagggaaaccattccagccaagtagtggtgataaaaaaat gtcaggtttagggaatcactacggtacattaagtggtccaataggggcatttagtccggcagctaggccaggaaaagatt ataaatctccagggaaaaattttatgacaaatccaggaaagaaaggcacaggttttggctatctggccgtcacattagga aaatatccaaattatcagggagatacttacgaaaaatacaaagaaattgccaggaaagaattagcagctcataaaagttc aataaagggttcaggtgctttccggttgaatatgcatccacgggcctactttgatgccaatccatatgcctctgataaat ttggtaaaagaggaggatctgctcaagtaccatcaaagaaaggagaccttaaaccatttaaacctagtagtcctggtaaa aagcctgcgggtatgaaagctggtactttcgatccttatccctcccactctgcagatccttataaagtccgagttagtcg agccatcaacgtggttaataagagcggtaaaatcttcatgccatcacaaggacccaaaaccacgcctactgtgtctattg ttaaccaaaatgttcagaaaacaatcaatatacagaactacaggtcagtgtcatctatcatatag |
|
| Transcript ID | pfu_aug2.0_14.1_13371.t2 |
| Definition | - |
>pfu_aug2.0_14.1_13371.t2 atgggtgaaaaaggaggaaagacagacatggaccgtatcggtcttttccaggaaatgggttatgttacaataaatgacaa atacagacaaccaggaatccttcagttcaatgatgctgcttctaaaggcaaacagatggttccagaaggaacgaaagcca gatcagctctgcaagcaggatattttgatacaaagtttggaagagtatttgaaggagaatcgtatacagacccaataaag ctaagacgacaacatagactcaaagaaatgcagagaaatatagggaaaccattccagccaagtagtggtgataaaaaaat gtcaggtttagggaatcactacggtacattaagtggtccaataggggcatttagtccggcagctaggccaggaaaagatt ataaatctccagggaaaaattttatgacaaatccaggaaagaaaggcacaggttttggctatctggccgtcacattagga aaatatccaaattatcagggagatacttacgaaaaatacaaagaaattgccagggcggatcaattttctctattgatcat tatgatcaaattatactcagtgtgtgtcataattattttaatacgcttcagctttcttggtataacactaggtgattatc caaaatatcaaacagacccgtatgaaagagctcgggaattaacaaagaaagaattagcagctcataaaagttcaataaag ggttcaggtgctttccggttgaatatgcatccacgggcctactttgatgccaatccatatgcctctgataaatttggtaa aagaggaggatctgctcaagtaccatcaaagaaaggagaccttaaaccatttaaacctagtagtcctggtaaaaagcctg cgggtatgaaagctggtactttcgatccttatccctcccactctgcagatccttataaagtccgagttagtcgagccatc aacgtggttaataagagcggtaaaatcttcatgccatcacaaggacccaaaaccacgcctactgtgtctattgttaacca aaatgttcagaaaacaatcaatatacagaactacaggtcagtgtcatctatcatatag |
|
Protein
| Protein ID | pfu_aug2.0_14.1_13371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13371.t1 MGEKGGKTDMDRIGLFQEMGYVTINDKYRQPGILQFNDAASKGKQMVPEGTKARSALQAGYFDTKFGRVFEGESYTDPIK LRRQHRLKEMQRNIGKPFQPSSGDKKMSGLGNHYGTLSGPIGAFSPAARPGKDYKSPGKNFMTNPGKKGTGFGYLAVTLG KYPNYQGDTYEKYKEIARKELAAHKSSIKGSGAFRLNMHPRAYFDANPYASDKFGKRGGSAQVPSKKGDLKPFKPSSPGK KPAGMKAGTFDPYPSHSADPYKVRVSRAINVVNKSGKIFMPSQGPKTTPTVSIVNQNVQKTINIQNYRSVSSII |
|
| Protein ID | pfu_aug2.0_14.1_13371.t2 |
| Definition | - |
>pfu_aug2.0_14.1_13371.t2 MGEKGGKTDMDRIGLFQEMGYVTINDKYRQPGILQFNDAASKGKQMVPEGTKARSALQAGYFDTKFGRVFEGESYTDPIK LRRQHRLKEMQRNIGKPFQPSSGDKKMSGLGNHYGTLSGPIGAFSPAARPGKDYKSPGKNFMTNPGKKGTGFGYLAVTLG KYPNYQGDTYEKYKEIARADQFSLLIIMIKLYSVCVIIILIRFSFLGITLGDYPKYQTDPYERARELTKKELAAHKSSIK GSGAFRLNMHPRAYFDANPYASDKFGKRGGSAQVPSKKGDLKPFKPSSPGKKPAGMKAGTFDPYPSHSADPYKVRVSRAI NVVNKSGKIFMPSQGPKTTPTVSIVNQNVQKTINIQNYRSVSSII |
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