Gene
| Gene Model ID | pfu_aug2.0_14.1_13373 |
|---|---|
| Locus | scaffold14.1 : 144524 ... 160025 : - |
| To GenomeBrowser | scaffold14.1:144524..160025 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_2917.1_30281 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| general vesicular transport factor p115 | GO:0000139 GO:0006886 GO:0048280 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13373.t1 | 1 | 1 | Uso1_p115_head | 280 | 563 | 0.0 | 252.4 | 0.0 | 0.0 | 251.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13373.t1 | gi|524866858|ref|XP_005090245.1| | PREDICTED: general vesicular transport factor p115-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_14.1_13373.t1 | gi|676490076|ref|XP_009065152.1| | hypothetical protein LOTGIDRAFT_108108 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_14.1_13373.t1 | gi|466060354|ref|XP_004280241.1| | PREDICTED: general vesicular transport factor p115 isoform X1 [Orcinus orca] | 0.0 |
| pfu_aug2.0_14.1_13373.t1 | gi|593736626|ref|XP_007113709.1| | PREDICTED: general vesicular transport factor p115 isoform X4 [Physeter catodon] | 0.0 |
| pfu_aug2.0_14.1_13373.t1 | gi|602686514|ref|XP_007455492.1| | PREDICTED: general vesicular transport factor p115 isoform X1 [Lipotes vexillifer] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13373.t1 atggtagagagacttgtggatagagtacagtcatctaccctgctagatgataggcgagatgctgttcgggcactcaaagc catgtcaaagaagttccgccttgaggtagggacccaagccatggacattctggtcaagactctggagatggataggagtg atgctgagattacaggatattgtctggatacgctgtgtaacatcatgtctaaccagccctctgaagacgatgacgaaagt aatataccaagtaatgtagcagaggacctagggactcagttcgcggaaatatttacaaagaatcaagacaatatatcgct attgttatcattgttggaggaatatgacttccatgtacgatggccaacggtcaagttactaaccattttgttgatgaatc ggggtaaagaattacaggaggttatactggtcagtcctatgggtgtgtcgaagctgatggaccttctgtcagatagcaga gagatcatacgtaatgatgccttgttgcttctgacgcaattaacaaaaaataatacaaatctacagaaaattgtggcttt tgaaaacgcatttgaacgtttactagatatcgtcagggatgaaggaaacagtgatggagtgggatggtcggctcagaaag tcaccaacatacatctcatgttgacactagtgaggtgccttgtatcaccaaataatccacaacaacaaagtactgcgtgc cagaggacaatgtttcagtgtggattattacagcagttgtctaagatccttatggccagtggcgtgccggcagatgttct cactgagaccattaacactgtatctgaggtcatcaggggaaatctacagaaccaggagtattttgcctctgtgatggctc catcaaacccacctagacctgccatagtcgtactgctgatgtccatggtgaacgagaagcagccttttactctccggtgt gccgtactatattgttttcagtctttcctctacaaaaatgaagtaggccaatcccagattgtacagaccttactccctac ctcctctgatgcaaacacgataagtgcaggtcagttgttatgtggtggtttgttcagtggagactctctctctaactggt ttgcctctgtagctctgcttcatgccattatggggaatgagcaacagaaagagcagctgttacgtgtacaactagctaca agcttaggcagtccccctgtctctctgttacagcagtgctgtaatatactggcccagggaggtaaagtacaaactaggat tggcttactgatgctgctctgtggttggatgatggactgtccaatagctgtagcccattttctggccaactcagcaaata taccttatttaataacccaagtatcggcctctgataacgatgagaatgagtcgatcgtccagggattgtgtgcattctca ctgggaatatctgttctcttcaatgatgactcaaatgaaactttcaataaagtttctttgagacaaataatagagaagag gataggattagaaaactttaccgacaaacttacacaagtgcctaagacagagagttatacaagggctgccaagaagccac accttcactacaaacagccgaatgaagttatctttgatcatgaattcactaaggcattcaaacttttagagactgatgca ttaaaagcagtctcgtcagaagcagtaatcaaagaacatcaagccaaaatggccagcatgcaggaacatgagaaagtggt caaacagtacaaagatctcatcgaagaacaggaccaacgtttgaatgaatcccagaaccagctgttacagcttcagtcca aacactccatggcccagcaagaactaaaacagctacaggatctggtccagcaactcaaggaccagaatgcactgctcaaa gtacaaaaaggtactgttgtgaatcacgttcctgatacaaaaatggaagaggaagtgaaatcattacgtacagatataga aaacctccgacttcaaaacgctgagaaagactcacggatagaaaaactgcaaacagatttaactttagcaggaacacgag ttttaaaccagagtgaagaagataaggaaaataatccaagtgaaagtgctgtgttacaaactacaatatctaggttacaa agtgatttacaggaattaagacagactgttgcagaaaaagataatgaaattagtaggataaatacacaaaatagtgatgc tttaaaacaaatagaagatttaaatcagagattatctagcagctcagaaaacctaccaggccctgaagaagttcaaaaac ttttagaagagaaaatgaccctgcaggaaagagtcaagaaatcgaatgaggaaagcctgaaaaatttagataaatataat aaatgtgaagaagaaaaaggtaaattaacagatgaaaagaaggaggttcaagaggaattagaaactttgaaaaaggaaca agaagatttactagtattacttgcagaccaagatacaaaaatagagaaatacaaagccaagttaaaggaggctggtgtac agtcagagatcaaatttggtatcacaggggctaaatgtgtaaacttgaacaagtttgttattgtaccactgaacgggaac cagcttatagtggagaattcagttgtccaagaagttttcacactgtttggatgtaagaaaggatggtag |
|
Protein
| Protein ID | pfu_aug2.0_14.1_13373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13373.t1 MVERLVDRVQSSTLLDDRRDAVRALKAMSKKFRLEVGTQAMDILVKTLEMDRSDAEITGYCLDTLCNIMSNQPSEDDDES NIPSNVAEDLGTQFAEIFTKNQDNISLLLSLLEEYDFHVRWPTVKLLTILLMNRGKELQEVILVSPMGVSKLMDLLSDSR EIIRNDALLLLTQLTKNNTNLQKIVAFENAFERLLDIVRDEGNSDGVGWSAQKVTNIHLMLTLVRCLVSPNNPQQQSTAC QRTMFQCGLLQQLSKILMASGVPADVLTETINTVSEVIRGNLQNQEYFASVMAPSNPPRPAIVVLLMSMVNEKQPFTLRC AVLYCFQSFLYKNEVGQSQIVQTLLPTSSDANTISAGQLLCGGLFSGDSLSNWFASVALLHAIMGNEQQKEQLLRVQLAT SLGSPPVSLLQQCCNILAQGGKVQTRIGLLMLLCGWMMDCPIAVAHFLANSANIPYLITQVSASDNDENESIVQGLCAFS LGISVLFNDDSNETFNKVSLRQIIEKRIGLENFTDKLTQVPKTESYTRAAKKPHLHYKQPNEVIFDHEFTKAFKLLETDA LKAVSSEAVIKEHQAKMASMQEHEKVVKQYKDLIEEQDQRLNESQNQLLQLQSKHSMAQQELKQLQDLVQQLKDQNALLK VQKGTVVNHVPDTKMEEEVKSLRTDIENLRLQNAEKDSRIEKLQTDLTLAGTRVLNQSEEDKENNPSESAVLQTTISRLQ SDLQELRQTVAEKDNEISRINTQNSDALKQIEDLNQRLSSSSENLPGPEEVQKLLEEKMTLQERVKKSNEESLKNLDKYN KCEEEKGKLTDEKKEVQEELETLKKEQEDLLVLLADQDTKIEKYKAKLKEAGVQSEIKFGITGAKCVNLNKFVIVPLNGN QLIVENSVVQEVFTLFGCKKGW |
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