Gene
| Gene Model ID | pfu_aug2.0_14.1_13377 |
|---|---|
| Locus | scaffold14.1 : 204126 ... 207292 : + |
| To GenomeBrowser | scaffold14.1:204126..207292 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13377.t2 | 2 | 1 | zf-B_box | 8 | 53 | 2.3e-11 | 43.3 | 8.9e-08 | 0.0013 | 18.5 |
| pfu_aug2.0_14.1_13377.t2 | 2 | 2 | zf-B_box | 61 | 98 | 2.3e-11 | 43.3 | 2.7e-11 | 4.1e-07 | 29.7 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13377.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13377.t1 atggctacggcgctgacgtcccaactacgctgtgagttgtgtggctccaggaagagttcagagtggaaatgttacgaatg ttctcagattatgtgtaaacgatgcaagaaactccatgttaaagccaacatatcaaaatatcacaatttcgtttctctga aacagagccgcgaggagagtaaggacagatgtcctaaccatccatcagaaacgtgtaccaaggagtgtacgacatgcggt cagtttgtgtgtgatgtgtgtatccaacaaaagcacaaaggtcatcaaatattgtttgtgcagcaagaaatcacagaaat gagagagatgtgtaggaggaatctgtctgacgtcaaagaaataggactctcaatagcactcaaagaaatggagacgttca gacaactgggtgatgactacaaagctaaaactcaggaactgctcaaagaggtgaccagcaggtacagtgcgtgggttgcc atggcaaaggacattcagaatgaccttctacaacaaattcagagtgtttataaactggacatgggttactatgagacgga gggcaaactgaggcagaatttgatattagaaatggaggatgtcattcagaacttccaggaggggatatcgggggacatga ggggcatcaaagacctcctcaaactgagggtaatcaacaggaaaatggaggagatgatgacgccagcacatgttcaggag aaacacctccctacgcttagtaatgggaatgtcaccattgaggtgatgcgtgacatgtttggagtactggcttatgatga caaatctcgcaagaaacaggtgcccgaagaaggtttacacgtttcagccgggcaatttcaaaacagacatatggaaacgc aaagaaatggccaggaaacaccgagagagcgaaacattacagaaacaaccgatacgcagcaaaatggatacccgacttca ccgagaaagaagaaagttaccatactaaaccacagtgacgatcaaacgccacattataatactgacgatcaggtaacaat gcaacgtaaaacaatcaacatcgttaatcaaaatacggagcataaaaattcgatgacagaacgagctcttgtaccatcct tgaacttcaatggtactcaacgaaacggagaacatacaagcggagaagagaacctatctatgacgagtagctgttccggt gacagtacacgaaaatacggcaatgacgtcacggactgcgacgatctaacgtgtcgaattagcattgaattctcgggtca aaagcatgctccttcaatcgcgcaaaagttccttcaaaattcagttgcaaggaatatcgtatcgcaaaaggatagtatta aacaagtgttctcgcctatcaaagccagggatagtatttttctaaattcaaagcttgcatctaaagaaaatataagtatc catgataccttcttcagcgaattgttttacgaggcgccttacgtggaaaagatatgtcatgtatacctaaagggtagatc taaagtgtgcagtgtatgtcccgtgggcgacaaggcatgggtggggttttctgacaaatccgtggcccttgtgaatggac agggggacgtcctgaagagatcccgcgtggacatacttcctatgcaccttacagcatcttactcaggggatgtcatcatc tgctcagagaacatgtgtattctaaaatctatgtccccaacagggttagttaaggagatgcacagattttctgttgagac gggtggggtttatgtcacaaggcaaggcagtaccctggtctccctcccgccctcagtaaagtaa |
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| Transcript ID | pfu_aug2.0_14.1_13377.t2 |
| Definition | - |
>pfu_aug2.0_14.1_13377.t2 atggctacggcgctgacgtcccaactacgctgtgagttgtgtggctccaggaagagttcagagtggaaatgttacgaatg ttctcagattatgtgtaaacgatgcaagaaactccatgttaaagccaacatatcaaaatatcacaatttcgtttctctga aacagagccgcgaggagagtaaggacagatgtcctaaccatccatcagaaacgtgtaccaaggagtgtacgacatgcggt cagtttgtgtgtgatgtgtgtatccaacaaaagcacaaaggtcatcaaatattgtttgtgcagcaagaaatcacagaaat gagagagatgtgtaggaggaatctgtctgacgtcaaagaaataggactctcaatagcactcaaagaaatggagacgttca gacaactgggtgatgactacaaagctaaaactcaggaactgctcaaagaggtgaccagcaggtacagtgcgtgggttgcc atggcaaaggacattcagaatgaccttctacaacaaattcagagtgtttataaactggacatgggttactatgagacgga gggcaaactgaggcagaatttgatattagaaatggaggatgtcattcagaacttccaggaggggatatcgggggacatga ggggcatcaaagacctcctcaaactgagggtaatcaacaggaaaatggaggagatgatgacgccagcacatgttcaggag aaacacctccctacgcttagtaatgggaatgtcaccattgaggtgatgcgtgacatgtttggagtactggcttatgatga caaatctcgcaagaaacaggtgcccgaagaaggtttacacgtttcagccgggcaatttcaaaacagacatatggaaacgc aaagaaatggccaggaaacaccgagagagcgaaacattacagaaacaaccgatacgcagcaaaatggatacccgacttca ccgagaaagaagaaagttaccatactaaaccacagtgacgatcaaacgccacattataatactgacgatcaggtaacaat gcaacgtaaaacaatcaacatcgttaatcaaaatacggagcataaaaattcgatgacagaacgagctcttgtaccatcct tgaacttcaatggtactcaacgaaacggagaacatacaagcggagaagagaacctatctatgacgagtagctgttccggt gacagtacacgaaaatacggcaatgacgtcacggactgcgacgatctaacgtgtcgaattagcattgaattctcgggtca aaagcatgctccttcaatcgcgcaaaagttccttcaaaattcagttgcaaggaatatcgtatcgcaaaaggatagtatta aacaagtgttctcgcctatcaaagccagggatagtatttttctaaattcaaagcttgcatctaaagaaaatataagtatc catgataccttcttcagcgaattgttttacgaggcgccttacgtggaaaagatatgtcatgtatacctaaagggtagatc taaagtgtgcagtgtatgtcccgtgggcgacaaggcatgggtggggttttctgacaaatccgtggcccttgtgaatggac agggggacgtcctgaagagatcccgcgtggacatacttcctatgcaccttacagcatcttactcaggggatgtcatcatc tgctcagagaacatgtgtattctaaaatctatgtccccaacaggactgacagnccctgccctcagcaaagtaatcagctt atctcagcgtggagagattgaagtcgagataagatacgctgataacggtgatgcactgttcaactatccatattcaatca cagaaaatattgatggtaatatatgtgttattgacggcaaaagctcgcggctcagagagcatagtcagtgtataatttgt gtggacaggaatgctctagtgttcaaatacaagtgtgagccaaagacagactttcagcatatagcatgtgatcagtactc aaacattatactatctgaccctagtaactataatataaagatgttaaaccgtaatggtgactatataggtgtgttaggga gggactccttcctactggtagagcctagatgtgtggtgtttgatgaacatttcaacttgtgggttgtcaatgacaaaaac agactgacagttgcaaagtacattattaactag |
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Protein
| Protein ID | pfu_aug2.0_14.1_13377.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13377.t1 MATALTSQLRCELCGSRKSSEWKCYECSQIMCKRCKKLHVKANISKYHNFVSLKQSREESKDRCPNHPSETCTKECTTCG QFVCDVCIQQKHKGHQILFVQQEITEMREMCRRNLSDVKEIGLSIALKEMETFRQLGDDYKAKTQELLKEVTSRYSAWVA MAKDIQNDLLQQIQSVYKLDMGYYETEGKLRQNLILEMEDVIQNFQEGISGDMRGIKDLLKLRVINRKMEEMMTPAHVQE KHLPTLSNGNVTIEVMRDMFGVLAYDDKSRKKQVPEEGLHVSAGQFQNRHMETQRNGQETPRERNITETTDTQQNGYPTS PRKKKVTILNHSDDQTPHYNTDDQVTMQRKTINIVNQNTEHKNSMTERALVPSLNFNGTQRNGEHTSGEENLSMTSSCSG DSTRKYGNDVTDCDDLTCRISIEFSGQKHAPSIAQKFLQNSVARNIVSQKDSIKQVFSPIKARDSIFLNSKLASKENISI HDTFFSELFYEAPYVEKICHVYLKGRSKVCSVCPVGDKAWVGFSDKSVALVNGQGDVLKRSRVDILPMHLTASYSGDVII CSENMCILKSMSPTGLVKEMHRFSVETGGVYVTRQGSTLVSLPPSVK |
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| Protein ID | pfu_aug2.0_14.1_13377.t2 |
| Definition | - |
>pfu_aug2.0_14.1_13377.t2 MATALTSQLRCELCGSRKSSEWKCYECSQIMCKRCKKLHVKANISKYHNFVSLKQSREESKDRCPNHPSETCTKECTTCG QFVCDVCIQQKHKGHQILFVQQEITEMREMCRRNLSDVKEIGLSIALKEMETFRQLGDDYKAKTQELLKEVTSRYSAWVA MAKDIQNDLLQQIQSVYKLDMGYYETEGKLRQNLILEMEDVIQNFQEGISGDMRGIKDLLKLRVINRKMEEMMTPAHVQE KHLPTLSNGNVTIEVMRDMFGVLAYDDKSRKKQVPEEGLHVSAGQFQNRHMETQRNGQETPRERNITETTDTQQNGYPTS PRKKKVTILNHSDDQTPHYNTDDQVTMQRKTINIVNQNTEHKNSMTERALVPSLNFNGTQRNGEHTSGEENLSMTSSCSG DSTRKYGNDVTDCDDLTCRISIEFSGQKHAPSIAQKFLQNSVARNIVSQKDSIKQVFSPIKARDSIFLNSKLASKENISI HDTFFSELFYEAPYVEKICHVYLKGRSKVCSVCPVGDKAWVGFSDKSVALVNGQGDVLKRSRVDILPMHLTASYSGDVII CSENMCILKSMSPTGLTXPALSKVISLSQRGEIEVEIRYADNGDALFNYPYSITENIDGNICVIDGKSSRLREHSQCIIC VDRNALVFKYKCEPKTDFQHIACDQYSNIILSDPSNYNIKMLNRNGDYIGVLGRDSFLLVEPRCVVFDEHFNLWVVNDKN RLTVAKYIIN |
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