Gene
| Gene Model ID | pfu_aug2.0_14.1_13378 |
|---|---|
| Locus | scaffold14.1 : 206177 ... 216405 : - |
| To GenomeBrowser | scaffold14.1:206177..216405 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_2917.1_30278 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription initiation factor tfiid subunit 2-like | GO:0006508 GO:0008237 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13378.t1 | 3 | 1 | HEAT_2 | 50 | 101 | 1.2e-08 | 35.1 | 6.4e-07 | 0.0032 | 17.7 |
| pfu_aug2.0_14.1_13378.t1 | 3 | 2 | HEAT_2 | 282 | 327 | 1.2e-08 | 35.1 | 7.7e-06 | 0.038 | 14.2 |
| pfu_aug2.0_14.1_13378.t1 | 3 | 3 | HEAT_2 | 343 | 364 | 1.2e-08 | 35.1 | 2.3 | 11000.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13378.t1 | gi|676423552|ref|XP_009044111.1| | hypothetical protein LOTGIDRAFT_228096 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_14.1_13378.t1 | gi|694653911|ref|XP_009483238.1| | PREDICTED: transcription initiation factor TFIID subunit 2, partial [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_14.1_13378.t1 | gi|383856938|ref|XP_003703963.1| | PREDICTED: transcription initiation factor TFIID subunit 2 [Megachile rotundata] | 0.0 |
| pfu_aug2.0_14.1_13378.t1 | gi|597786899|ref|XP_007256905.1| | PREDICTED: transcription initiation factor TFIID subunit 2 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_14.1_13378.t1 | gi|380013884|ref|XP_003690975.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13378.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13378.t1 atgacaggagaggaagtggacatggatcttagtgctatggatgccgactcaccagttttatggcttcgagttgacccaga tatgaacttgctaagtcatgtgacctgggaacaacctgattatatgtggcaatatcaactcaagtttgagagagatgtcg tggctcagaaagaggctatagatgctctgataaactaccctaccacagctacaaggaaagccttaacggacattctcgag aatgaacattgtttttacagagtcaggatggaggctgcttattgtctagccaaggtagctaattccatggtcagtagtgc ttggaatggtcctccagccatgatgacaattttccgtaagctgttcggttcccactcatgtcctgccattatcagacaaa acaatttctcaaactttcagcattattttcttctcaagactatcccccttgccatggccttactaaggaatataaacacc atgtgcccacctgatgtgttttatttcatcatggagctgttcaaatataatgacaatagcaggaacaagtattcagacaa ctactatagagctgccctagttgatgctgcagctacaactgtcacaccagctataacactgatgtcagcaacagggaagg gaccaagctcggagaatttatcagttgagaccaaacagatcttggaggagattacacggtaccttaacctggataaatta ttaccgtgttacagacatacagttactgtcagttgtctaagagctatccggacactacagaagtttggccacttgccgag tgaagttgaattctttaagagttacgcagtacatggtgtattcagggacgttagacaggctgccatagaggctgttgtgg atttcatcagaacggagtccagaccagaagatttgtactggcttcttgagatggtggaacaagacccagatatgtacatg aggcattttgtgctgagtcagctggtagtaaatccaccatttcgtcgtgtagattccagctcactacacacagagggtct tgtagaaagattatggaaaatgatgaattcttcctcatttttagctcgccgggacgaaaaattctggagagctaatgcca taccctcggcatcgtcgttgttgtcatcgtctgtagacaaacctgggctatatctcttgaactataagggggtcagatag |
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Protein
| Protein ID | pfu_aug2.0_14.1_13378.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13378.t1 MTGEEVDMDLSAMDADSPVLWLRVDPDMNLLSHVTWEQPDYMWQYQLKFERDVVAQKEAIDALINYPTTATRKALTDILE NEHCFYRVRMEAAYCLAKVANSMVSSAWNGPPAMMTIFRKLFGSHSCPAIIRQNNFSNFQHYFLLKTIPLAMALLRNINT MCPPDVFYFIMELFKYNDNSRNKYSDNYYRAALVDAAATTVTPAITLMSATGKGPSSENLSVETKQILEEITRYLNLDKL LPCYRHTVTVSCLRAIRTLQKFGHLPSEVEFFKSYAVHGVFRDVRQAAIEAVVDFIRTESRPEDLYWLLEMVEQDPDMYM RHFVLSQLVVNPPFRRVDSSSLHTEGLVERLWKMMNSSSFLARRDEKFWRANAIPSASSLLSSSVDKPGLYLLNYKGVR |
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