Gene
| Gene Model ID | pfu_aug2.0_14.1_13379 |
|---|---|
| Locus | scaffold14.1 : 216457 ... 226355 : - |
| To GenomeBrowser | scaffold14.1:216457..226355 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_2917.1_30278 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription initiation factor tfiid subunit 2-like | GO:0006508 GO:0008237 GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13379.t1 | 1 | 1 | Peptidase_M1 | 2 | 193 | 4.4e-09 | 35.9 | 6.9e-13 | 5.1e-09 | 35.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13379.t1 | gi|241095546|ref|XP_002409520.1| | transcription initiation factor TFII-D subunit, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_14.1_13379.t1 | gi|751233856|ref|XP_011170630.1| | PREDICTED: transcription initiation factor TFIID subunit 2-like, partial [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_14.1_13379.t1 | gi|665808430|ref|XP_008552536.1| | PREDICTED: transcription initiation factor TFIID subunit 2 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_14.1_13379.t1 | gi|242003978|ref|XP_002422931.1| | transcription initiation factor TFIID subunit, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13379.t1 atgacagctgtatcatgtggtgatcttatagaagtcattgctactcctgacagaaaacgtaaaaccttccattacttctt atctaacccaacggcagcaccaaacattgctctggctgtcgggccctttgagattctggtggaccctaacatgcatgagg taactcatttctgtctaccacaccttactgacatcctgaagcaaactacaggctacattcatgaggcgtttgagttttat gaagagttactgtccagtagatacccatactcctgttataaacaggtctttgtggacgagagttatgatgaagttgcatc atatgctaccatgactatttttagcacaaacctcctgcattcttctcgtataattgatcagacgatagagacaagaaaat gtatggcggctgcggtagcatcacaattctttggaacatttatcagcatgcagtcatggtatgatgcttggctaccaatg ggaatctctggatatcttagagcactgtatataaagaaaacctttggtaacaatgaatacagatttatggtggctgagta tctaaaagacgttcaagaatttgagaaccgtgtagggggtataatactggacccatccaagcgtgactctaaccatcatt tctcaatacgtaacagtcataccgtgtcacataaatatcgacaagtgttctgtaagaaagctatgctcgttaccagaatg ctggaacaaaggattgggtttcaattactggttcaggttatcaacaaacttctctccctggcctatacaggggctcagca aaagtttacagcaaacacctggggaaacctactactatctacagactcatttttgaagatcatatcaactgtcacgggaa aagacattgcacctttcttggacctctgggtggtccacttacagtga |
|
Protein
| Protein ID | pfu_aug2.0_14.1_13379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13379.t1 MTAVSCGDLIEVIATPDRKRKTFHYFLSNPTAAPNIALAVGPFEILVDPNMHEVTHFCLPHLTDILKQTTGYIHEAFEFY EELLSSRYPYSCYKQVFVDESYDEVASYATMTIFSTNLLHSSRIIDQTIETRKCMAAAVASQFFGTFISMQSWYDAWLPM GISGYLRALYIKKTFGNNEYRFMVAEYLKDVQEFENRVGGIILDPSKRDSNHHFSIRNSHTVSHKYRQVFCKKAMLVTRM LEQRIGFQLLVQVINKLLSLAYTGAQQKFTANTWGNLLLSTDSFLKIISTVTGKDIAPFLDLWVVHLQ |
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