Gene
| Gene Model ID | pfu_aug2.0_14.1_13380 |
|---|---|
| Locus | scaffold14.1 : 226526 ... 255482 : + |
| To GenomeBrowser | scaffold14.1:226526..255482 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_20050.1_04063 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13380.t1 | 2 | 1 | ArfGap | 8 | 115 | 6.7e-33 | 112.9 | 4.5e-37 | 6.7e-33 | 112.9 |
| pfu_aug2.0_14.1_13380.t1 | 2 | 2 | ArfGap | 598 | 625 | 6.7e-33 | 112.9 | 0.24 | 3500.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13380.t1 | gi|685565433|ref|XP_009214038.1| | PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X4 [Papio anubis] | 0.0 |
| pfu_aug2.0_14.1_13380.t1 | gi|602631974|ref|XP_007422883.1| | PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [Python bivittatus] | 0.0 |
| pfu_aug2.0_14.1_13380.t1 | gi|676452656|ref|XP_009053101.1| | hypothetical protein LOTGIDRAFT_202235, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_14.1_13380.t1 | gi|507699731|ref|XP_004644213.1| | 0.0 | |
| pfu_aug2.0_14.1_13380.t1 | gi|514704301|ref|XP_005009282.1| | PREDICTED: ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [Anas platyrhynchos] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13380.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13380.t1 atggccagtccaaggacgagaagggttttaaaagatctacggatcaaagacgacaataataaatgttttgagtgtaatgc tcacaatccacaatgggtgagtgtgacttacggaatatggatttgtctggagtgttcaggcaaacacagaggacttggag ttcacctcagttttgtaagatcagtgtccatggacaaatggaaagacacggaattagagaaaatgaaagtaggaggaaat cgtcaagctttagaattttttaagtcacaatcagattacaatggaggaatgtctatacaagaaaaatacaacagcaaggc tgctgccctatacagagataaggagaaccacattgtacatcataatctacattgtacaaaacatttctttttcagtgaag aatttaaaaaggagagagacaatttctttgatagagttcaagcacaaaatgccagcagacctgatggtataccaccaagt cagggaggaaaatatgtaggctttggcagcacacctgctccacaagagaagaaagatgacttctttgagaatactttatc atctttatccactggttggtcatcatttactgtaggagccacaaagtttgcatctgttgcatcagaaaaggcctccaagt ttgcaagtgcagctggacagaaaaccaaggaatttggggaaactgtcaatgagtctgttataagacctaccaaggataag gtaaaagagggaaacctaattaacgaagttggcacctccatgagtgggtttgcagccaagttatcatcagctagttcaaa aggctggagtaattttcaatcactatggggagaacccaagacaaccttgtctactgtggacacaagccctggggagaagt cctctctcctaacagcccagggctctattgacaggtttgtacatgttactatagccatactgtctactgtggacacatgc cctggggagaaatcctctctactaacagcacagggctctattgacaggtttgtacatgttactatagccatactgtctac tgtggacacaagccctggggagatgtcctctctactaacagcacagggctctattgacaggtttgtacatgttactatag ccatactgtctactgtggacacatgccctggggagaaatcctctctactaacaacacagggctctatttacaggtatgta catgttactatagccatactgtctactgtggacacaagccctggggagaagtcctctctactaacaacacagggctctat ttacaggtttgtacatgttactatagccatactgtctactgtggacacatgccctggggagaaatcctctcaactaacaa cacagggctctatttacaggtttgtacatgttactatagccatactgtctactgtggacacatgccctggggagaagtcc tctctactaacaacacagggctctatttacaggtttgtacatgttactatagccatactgtctactgtggacacatgccc tggggagaaatcctctctactaacagcacagggctctattgacagtgaccccagtaaaaatcggcttttatctgaagatg acaactcatggggagccgactgggatgataattggaaggatacagacacagagaaaaaagggaagaaaacagcaaattca gactgggatgcttcacctactaatgaggacgaagctttcgaggcttggctaaatgacgacacacctctacaactaacaaa gtcacagtcaaaaaagtcagacgatggctgggacagttggcctgaagaaaagtctcaaaaacctaaaaaatctaataaca aaagtgacaaaaatatgagtaagaagtcttccaaagtgaaatctgaggacggatggaacaatgcagactgggacatggga tttaattcaataaataaaaaacaaaaggaaccattagtaggcaatctattagacttaagtgacgatacacccgcacagaa taacgataattccggatgggacaatgaagtatgggcaaaggacggtgatgaagatgaggcgtggcaaagtctagacgcag gcggctcagaatatagtaaacttaagtaa |
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Protein
| Protein ID | pfu_aug2.0_14.1_13380.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13380.t1 MASPRTRRVLKDLRIKDDNNKCFECNAHNPQWVSVTYGIWICLECSGKHRGLGVHLSFVRSVSMDKWKDTELEKMKVGGN RQALEFFKSQSDYNGGMSIQEKYNSKAAALYRDKENHIVHHNLHCTKHFFFSEEFKKERDNFFDRVQAQNASRPDGIPPS QGGKYVGFGSTPAPQEKKDDFFENTLSSLSTGWSSFTVGATKFASVASEKASKFASAAGQKTKEFGETVNESVIRPTKDK VKEGNLINEVGTSMSGFAAKLSSASSKGWSNFQSLWGEPKTTLSTVDTSPGEKSSLLTAQGSIDRFVHVTIAILSTVDTC PGEKSSLLTAQGSIDRFVHVTIAILSTVDTSPGEMSSLLTAQGSIDRFVHVTIAILSTVDTCPGEKSSLLTTQGSIYRYV HVTIAILSTVDTSPGEKSSLLTTQGSIYRFVHVTIAILSTVDTCPGEKSSQLTTQGSIYRFVHVTIAILSTVDTCPGEKS SLLTTQGSIYRFVHVTIAILSTVDTCPGEKSSLLTAQGSIDSDPSKNRLLSEDDNSWGADWDDNWKDTDTEKKGKKTANS DWDASPTNEDEAFEAWLNDDTPLQLTKSQSKKSDDGWDSWPEEKSQKPKKSNNKSDKNMSKKSSKVKSEDGWNNADWDMG FNSINKKQKEPLVGNLLDLSDDTPAQNNDNSGWDNEVWAKDGDEDEAWQSLDAGGSEYSKLK |
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