Gene
| Gene Model ID | pfu_aug2.0_14.1_13381 |
|---|---|
| Locus | scaffold14.1 : 267216 ... 269125 : - |
| To GenomeBrowser | scaffold14.1:267216..269125 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_57367.1_48874 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| class e basic helix-loop-helix protein 22 | GO:0000981 GO:0003682 GO:0005634 GO:0006357 GO:0021540 GO:0021796 GO:0021957 GO:0021960 GO:0042803 GO:0045892 GO:0060040 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13381.t1 | 1 | 1 | HLH | 117 | 168 | 4.8e-15 | 55.0 | 4.0e-19 | 6.0e-15 | 54.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13381.t1 | gi|524911345|ref|XP_005110537.1| | PREDICTED: class E basic helix-loop-helix protein 22-like [Aplysia californica] | 4.99983e-42 |
| pfu_aug2.0_14.1_13381.t1 | gi|742165325|ref|XP_010884202.1| | PREDICTED: class E basic helix-loop-helix protein 22 [Esox lucius] | 1.99993e-41 |
| pfu_aug2.0_14.1_13381.t1 | gi|31419015|gb|AAH53312.1| | Basic helix-loop-helix family, member e22 [Danio rerio] | 1.99993e-41 |
| pfu_aug2.0_14.1_13381.t1 | gi|426236117|ref|XP_004012021.1| | 4.99997e-41 | |
| pfu_aug2.0_14.1_13381.t1 | gi|347800684|ref|NP_957249.2| | class E basic helix-loop-helix protein 22 [Danio rerio] | 5.99994e-41 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13381.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13381.t1 atgaatgattcaggctctgatagtaacgaaaatgcccaaaacacttacgaaaatttcagtggaggagcttaccccacaaa ctatcgtccgtctgtacattctgatatagcaagtgatgggaaacgagataattacggtgcagaaaatatccaattaaaac aaaatctggaggattctgaaaatttatatagaaatataaacgttgacggaaacagcagcgacgacagtagtgatactaac ctctcagacgggtaccgccatcaatgtgacggcttacaggaggcgtacggtgaacacgagttggagtccaagcacaaaca taaaagaaacaaaggcgaaaaggtggtacgcctgaacattaacgccagggaacgcagacgcatgcacgacctaaacgacg ccctggacgagttaaggtcagtgataccctacgcccatagtccctccgtgcgtaaactctccaaaatcgccaccctcctt ctagctaaaaactacatactgatgcaggccaacgctctggaagaaatgaggcgtatgatagcctacatgaacaccgcgca ggccactacgccgtgctttgagccgttctccgcgtatggccgacttcagggtatgcaggccagtatgacgtcagacagtg aacacaactcgaacaagtgcgcgccgctatttggtatgcagaaaagtgacccttcaagaaagtga |
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Protein
| Protein ID | pfu_aug2.0_14.1_13381.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13381.t1 MNDSGSDSNENAQNTYENFSGGAYPTNYRPSVHSDIASDGKRDNYGAENIQLKQNLEDSENLYRNINVDGNSSDDSSDTN LSDGYRHQCDGLQEAYGEHELESKHKHKRNKGEKVVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLL LAKNYILMQANALEEMRRMIAYMNTAQATTPCFEPFSAYGRLQGMQASMTSDSEHNSNKCAPLFGMQKSDPSRK |
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