Gene
| Gene Model ID | pfu_aug2.0_14.1_13383 |
|---|---|
| Locus | scaffold14.1 : 293296 ... 300566 : + |
| To GenomeBrowser | scaffold14.1:293296..300566 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_60297.1_05677 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| intron-binding protein aquarius | GO:0000398 GO:0005681 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13383.t1 | 1 | 1 | AAA_11 | 3 | 291 | 4.1e-30 | 105.1 | 9.0e-33 | 6.4e-30 | 104.4 |
| pfu_aug2.0_14.1_13383.t1 | 2 | 1 | AAA_19 | 4 | 57 | 1.9e-10 | 40.3 | 3.4e-12 | 2.4e-09 | 36.8 |
| pfu_aug2.0_14.1_13383.t1 | 2 | 1 | AAA_12 | 19 | 44 | 1.3e-23 | 83.4 | 8.6 | 6100.0 | -3.7 |
| pfu_aug2.0_14.1_13383.t1 | 2 | 2 | AAA_19 | 209 | 232 | 1.9e-10 | 40.3 | 0.66 | 470.0 | 0.6 |
| pfu_aug2.0_14.1_13383.t1 | 2 | 2 | AAA_12 | 356 | 482 | 1.3e-23 | 83.4 | 2.2e-25 | 1.6e-22 | 79.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13383.t1 | gi|676421926|ref|XP_009043888.1| | hypothetical protein LOTGIDRAFT_227972 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_14.1_13383.t1 | gi|524908277|ref|XP_005109242.1| | PREDICTED: intron-binding protein aquarius-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_14.1_13383.t1 | gi|557004436|ref|XP_006004125.1| | PREDICTED: intron-binding protein aquarius [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_14.1_13383.t1 | gi|573889588|ref|XP_006632558.1| | PREDICTED: intron-binding protein aquarius-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_14.1_13383.t1 | gi|734612182|ref|XP_010733533.1| | PREDICTED: LOW QUALITY PROTEIN: intron-binding protein aquarius [Larimichthys crocea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13383.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13383.t1 atgcagcctggtctaaccatggtggtcgggccacctggtaccggtaaaactgacgtagctgtacaaatcatctcaaactt ataccataacttcccagaacagagaactctcattgtcacacactcaaaccaggcattgaaccagttatttgagaagatca tggcactcgacattgatgagcgacatttattacgactcggtcatggtgaggaagcattggagacagagaaggatttcagc agatatggaagagtaaattttgtgctggcacagagattggagttattagaggaagtaggacgattacagaacagtcttaa tgtaccaggtgacatgtcatatacctgtgagacggctggctatttctacctgtatcaggtgctggccagatgggaagaat ttcagagtaaattacgccaacaaaaggaaaaaagagcagagacgatacaaagagagtttccattcacaaagttctttgac aatgcacctcagccactgttcaaaggagaatcgtatgctggtgatatggacattgctgaggggtgcttcaggcacattaa gaaaattttcacacaaatagaggagtttcgagcatttgagttgcttcgtagtggatcagacagagcagagtatctactta taaaggaagctaagattattgccatgacgtgtacacatgctgctctcaaacgtagggatctggtctctttaggatttaag tttgataatattttgatggaagaatcagcacagatccttgagatagaaaccttcattccactactgttgcagaatccaga ggacaacataaaccgtttgaagcgttggatcatgataggagatcaccatcagcttcctcccgtcatcaagaacatggcgt tccagaagttctccaacatggagcagtcactgttcactcggcttgttcgcctgggtgttccaactgtagatctagatgct cagggaagggctcgagcaaggtataaaaagctaggaaatttatcgcatgttcttgtggagcaagagtatagggtggccaa tccaggattcgtgtttgacttccaacttattgacgttcaaaattttaacggagttggagaatcggaacctaatccgtatt tctatcagaatcttgcggaggcagaatacgttgtggctatgtttatgtacatgagactgctgggatatccagcggagaag atatcgatcctcacaacatataatggacagaaacacttgatacgtgatgtgattcatcagagatgtgggaaaaacccgtt cattggaagaccaagtaaagtaacaacagtggacaggtaccaaggacagcagaatgattatatactattgtcgttagtaa ggaccaaagctgtaggccatcttagggacgtgagaaggttggtagtagctatgtccagagctcgtcttggcctgtacgtc ttcgctcgagtctcactgttcagtaactgctttgaactaacaccaacatttaacaagctgattgatcaagttacagagaa agtagtgattattaaggacatgccagactttgcccagtttgtgtttgatttgtacaactccagaatctctcagctgatgg cggatcacaatgccggaggagaggtacacgtgagagagttatctcgtcctcctaggcgatactaa |
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Protein
| Protein ID | pfu_aug2.0_14.1_13383.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13383.t1 MQPGLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDFS RYGRVNFVLAQRLELLEEVGRLQNSLNVPGDMSYTCETAGYFYLYQVLARWEEFQSKLRQQKEKRAETIQREFPFTKFFD NAPQPLFKGESYAGDMDIAEGCFRHIKKIFTQIEEFRAFELLRSGSDRAEYLLIKEAKIIAMTCTHAALKRRDLVSLGFK FDNILMEESAQILEIETFIPLLLQNPEDNINRLKRWIMIGDHHQLPPVIKNMAFQKFSNMEQSLFTRLVRLGVPTVDLDA QGRARARYKKLGNLSHVLVEQEYRVANPGFVFDFQLIDVQNFNGVGESEPNPYFYQNLAEAEYVVAMFMYMRLLGYPAEK ISILTTYNGQKHLIRDVIHQRCGKNPFIGRPSKVTTVDRYQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLYV FARVSLFSNCFELTPTFNKLIDQVTEKVVIIKDMPDFAQFVFDLYNSRISQLMADHNAGGEVHVRELSRPPRRY |
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