Gene
| Gene Model ID | pfu_aug2.0_14.1_13385 |
|---|---|
| Locus | scaffold14.1 : 329176 ... 350450 : + |
| To GenomeBrowser | scaffold14.1:329176..350450 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_1064.1_15335 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cell cycle checkpoint protein rad17 isoform x2 | GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13385.t1 | 1 | 1 | Rad17 | 66 | 512 | 0.0 | 329.7 | 0.0 | 0.0 | 329.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13385.t1 | gi|557005490|ref|XP_006004442.1| | PREDICTED: cell cycle checkpoint protein RAD17-like isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_14.1_13385.t1 | gi|632963591|ref|XP_007897970.1| | PREDICTED: cell cycle checkpoint protein RAD17 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_14.1_13385.t1 | gi|632963589|ref|XP_007897969.1| | PREDICTED: cell cycle checkpoint protein RAD17 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_14.1_13385.t1 | gi|532067477|ref|XP_005319585.1| | PREDICTED: cell cycle checkpoint protein RAD17 [Ictidomys tridecemlineatus] | 0.0 |
| pfu_aug2.0_14.1_13385.t1 | gi|704546845|ref|XP_010178434.1| | PREDICTED: cell cycle checkpoint protein RAD17, partial [Mesitornis unicolor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13385.t1 atgagctggattgatccatcatttcaagattttggagatttttcttcgtcatcgcagagtaaaccattccgaaaaaggcc aggtttgacgtcatcacaaggatcttcactaaagaaagaaaaaagcattttaccaaattctgtgcatcagatcaagacaa aaagaaatccaaatgaaacatgggcagatagatatcaaccacataccacgcgtcctggaatattgttattaacgggaccc actggggctggtaagacggctacgttacgtgtccttgccagagaactcaagtgtgacatcaaggaatgggccaatcctga tgtcaagagacaatacaatgagtggagtcaaactggtggtgtcttcacatcaggttctgagtattcccgtgttggaactg tatcagattcccagatagccaggtttcagcagtaccttctcagtgcttacaagtataatacactaagtatatttgggagt gaggtggaaaagaaaaaaatcattttagttgaggacattccaaacatatttggcagagatccgtcatcatttcatggaat tttaaggaagtactcccagactggtcgctgtcctatagtatttgtactaagtgatggtgctacaggagaatttaataaaa atgtcctcttccccaaggagcttgaacatcaaattaacattactaatataagcttcaatccagtggcatctaccagcatg aataaagtcctcaataaggttgtggctacagagctagctctgaaaacatcgaatttccatcctccatccaagtctgtagt agagtccatatcaatgtccagtgcaggtgatatcagagctgccattaatgctctacagtttgcttgtctcaaagattcct ctgatttagtaataaagcctaagtcaaaagttaaagccaaaagacagaagcaggataccaaagggaaagctaagccaaca gatgacggggaactagcttctataggtggaaaggacacctcacttttcctgttcagagccttaggaaaaatcctgtattg taaacgagatgacccatcgaaccacaccgatcttcctaaattaccctcccatctacaggaccatgaaagagatcctctac tcattaacccagaggatgtgatagagaaatgtaacatatcgggagaatattttgtggcgtatctacatcagaattaccta gatttctactccaccatagaggacatagtgagagcttcacaatacatcagcgactcagacttcctcaccagagactggaa ttctaggtccaaacttcagcaggtgggggcttctgtcagtacccgaggtcttatccactctaactcagcaagggcgcggt tcacatcctcaggcacggggctaggatggaaaccactccataaaccacagtggtatacattatgtaaacagagaagggag aattttgatgtctcaagatcactttacaaagacttcactcagcatgtaattcttcacacagagatcttgccatactccat gacattgaatgtaacctctttaagtctaagtaaaagaaactttgtaaggcagatatgtagatttactcatactacaagct ctcgttcagagcgtttagatgacaatgctgtggacgaagatgattcatctcagagattagaggaaacagatgacagcagc aatactcgggacaagtttgttttggatagcgagtcgtcaaatacagggactgaggtgatagtggagaatgatgaggaaga atataacatagaggaatacaatgactga |
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Protein
| Protein ID | pfu_aug2.0_14.1_13385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13385.t1 MSWIDPSFQDFGDFSSSSQSKPFRKRPGLTSSQGSSLKKEKSILPNSVHQIKTKRNPNETWADRYQPHTTRPGILLLTGP TGAGKTATLRVLARELKCDIKEWANPDVKRQYNEWSQTGGVFTSGSEYSRVGTVSDSQIARFQQYLLSAYKYNTLSIFGS EVEKKKIILVEDIPNIFGRDPSSFHGILRKYSQTGRCPIVFVLSDGATGEFNKNVLFPKELEHQINITNISFNPVASTSM NKVLNKVVATELALKTSNFHPPSKSVVESISMSSAGDIRAAINALQFACLKDSSDLVIKPKSKVKAKRQKQDTKGKAKPT DDGELASIGGKDTSLFLFRALGKILYCKRDDPSNHTDLPKLPSHLQDHERDPLLINPEDVIEKCNISGEYFVAYLHQNYL DFYSTIEDIVRASQYISDSDFLTRDWNSRSKLQQVGASVSTRGLIHSNSARARFTSSGTGLGWKPLHKPQWYTLCKQRRE NFDVSRSLYKDFTQHVILHTEILPYSMTLNVTSLSLSKRNFVRQICRFTHTTSSRSERLDDNAVDEDDSSQRLEETDDSS NTRDKFVLDSESSNTGTEVIVENDEEEYNIEEYND |
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