Gene
| Gene Model ID | pfu_aug2.0_14.1_13386 |
|---|---|
| Locus | scaffold14.1 : 354945 ... 363240 : - |
| To GenomeBrowser | scaffold14.1:354945..363240 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_1064.1_15333 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hydroxysteroid dehydrogenase-like protein 2-like | GO:0016491 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13386.t1 | 1 | 1 | adh_short | 11 | 185 | 1.1e-15 | 57.9 | 6.5e-19 | 1.9e-15 | 57.1 |
| pfu_aug2.0_14.1_13386.t1 | 1 | 1 | adh_short_C2 | 19 | 220 | 4.1e-07 | 30.0 | 1.9e-10 | 5.7e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13386.t1 | gi|585687062|ref|XP_006820427.1| | PREDICTED: LOW QUALITY PROTEIN: hydroxysteroid dehydrogenase-like protein 2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_14.1_13386.t1 | gi|156388200|ref|XP_001634589.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_14.1_13386.t1 | gi|676424013|ref|XP_009044177.1| | hypothetical protein LOTGIDRAFT_205585 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_14.1_13386.t1 | gi|524910895|ref|XP_005110321.1| | PREDICTED: hydroxysteroid dehydrogenase-like protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_14.1_13386.t1 | gi|260811740|ref|XP_002600580.1| | hypothetical protein BRAFLDRAFT_276673 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13386.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13386.t1 atggctgcagctgcaaggagtttagcaggaaagactttgttcatcactggagcaagtcgggggattggtaaagctatagc actgagggcggcacaagatggggctaacatcgttatagctgccaagacagcagagccacacccaaaactacctggtacca tctacacagctgccaaggaagttgaggatgcaggaggtaaatgtttaccatgtattgttgatatacgatttgaggaccag gtacgtaaagctgcagaggaagctgccaataagtttggtggtatagatatccttataaacaacgcaagtgccataaatct gaccggcacgttacagacaggaatgaagaaatatgaccttatgatgggcataaatgggagaggaacttatctatgttctc atgtctgtttaccataccttatgaaggcagagaatccacatatacttaatattagtccacctcttaatatgaataaaaag tggttcaaagatcatgtagcctacacaatggccaagtatggaatgtctatgtgtgccctaggaatgtcagaagaattcaa accagatggtgtggctgtcaactgtctatggccaaaaactgctatatatacagcagctatggccatgttagggggcggag atgaagtggctaaacaatgccgtaaggtagaaataatgagtgacgcagcccacatcatgttaacaaataatagcaagacg tataccggtaactttgctgtagatgaggatgttatgaaggaggccggtgtaactgacatggagcagtacgcatgtgtacc aggcagcacaatcctccccgacttcttccttgatttggaccctaatgagctgagggaccagtttgtggaggaagganata aaattttcatgaacaaaaaacctctcatttggtgcatgacagtgcaagtgtga |
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Protein
| Protein ID | pfu_aug2.0_14.1_13386.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13386.t1 MAAAARSLAGKTLFITGASRGIGKAIALRAAQDGANIVIAAKTAEPHPKLPGTIYTAAKEVEDAGGKCLPCIVDIRFEDQ VRKAAEEAANKFGGIDILINNASAINLTGTLQTGMKKYDLMMGINGRGTYLCSHVCLPYLMKAENPHILNISPPLNMNKK WFKDHVAYTMAKYGMSMCALGMSEEFKPDGVAVNCLWPKTAIYTAAMAMLGGGDEVAKQCRKVEIMSDAAHIMLTNNSKT YTGNFAVDEDVMKEAGVTDMEQYACVPGSTILPDFFLDLDPNELRDQFVEEGXKIFMNKKPLIWCMTVQV |
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