Gene
| Gene Model ID | pfu_aug2.0_14.1_13388 |
|---|---|
| Locus | scaffold14.1 : 382691 ... 391755 : + |
| To GenomeBrowser | scaffold14.1:382691..391755 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_1064.1_15332 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| non-specific lipid-transfer protein | GO:0000062 GO:0005515 GO:0005634 GO:0005777 GO:0006869 GO:0008289 GO:0010893 GO:0016043 GO:0016747 GO:0032879 GO:0036094 GO:0044237 GO:0044283 GO:0044421 GO:0044763 GO:0050794 GO:0051641 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13388.t1 | 4 | 1 | Thiolase_C | 17 | 34 | 1.3e-15 | 56.8 | 4.3 | 7100.0 | -3.7 |
| pfu_aug2.0_14.1_13388.t1 | 3 | 1 | Thiolase_N | 17 | 102 | 4.5e-08 | 32.4 | 2.2e-10 | 3.7e-07 | 29.4 |
| pfu_aug2.0_14.1_13388.t1 | 3 | 2 | Thiolase_N | 206 | 222 | 4.5e-08 | 32.4 | 0.23 | 380.0 | -0.2 |
| pfu_aug2.0_14.1_13388.t1 | 3 | 3 | Thiolase_N | 246 | 281 | 4.5e-08 | 32.4 | 0.75 | 1200.0 | -1.9 |
| pfu_aug2.0_14.1_13388.t1 | 4 | 2 | Thiolase_C | 265 | 354 | 1.3e-15 | 56.8 | 2.5e-08 | 4.2e-05 | 22.9 |
| pfu_aug2.0_14.1_13388.t1 | 4 | 3 | Thiolase_C | 354 | 454 | 1.3e-15 | 56.8 | 1.0e-10 | 1.7e-07 | 30.7 |
| pfu_aug2.0_14.1_13388.t1 | 4 | 4 | Thiolase_C | 451 | 473 | 1.3e-15 | 56.8 | 0.096 | 160.0 | 1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13388.t1 | gi|524910897|ref|XP_005110322.1| | PREDICTED: non-specific lipid-transfer protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_14.1_13388.t1 | gi|676424016|ref|XP_009044178.1| | hypothetical protein LOTGIDRAFT_208622 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_14.1_13388.t1 | gi|156361090|ref|XP_001625353.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_14.1_13388.t1 | gi|449669804|ref|XP_002154014.2| | 0.0 | |
| pfu_aug2.0_14.1_13388.t1 | gi|573894296|ref|XP_006634898.1| | PREDICTED: non-specific lipid-transfer protein-like isoform X1 [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13388.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13388.t1 atggctgatgaatacggaaaaattataaattgtttaaattccacccaaagccaggatgcgctgactgatgcaggcataag ctatgacaagatacaagctgtggtagccagttattgttacggagaaccaacctgtggacagagggcagcgtatgagctgg gcctgagtggtgtgccaatatttaatgtcaataataactgttcctcgggatccagtgccttaatgctggcacgtcgatta atacaaagtggactggaggactgtgtgctggcactggggtttgagaagatggagagaggattgtcagagagatacaatga ccgtacatctcctgtcaaaccacagatggaccacatggtgtctataggagcagagccaggtctggtacagccacacctta atactattacgtcagatgttgtcaaactttatgcctatgcagccagggagtacatgaaaaaatatcctgacaccaaggta tcagactttgtaaacatcgcttacaaaaaccacaggcatagtgttaataatcctaaagctaccatacagaaagccatacc accagaagttatacgctcaaaattaccactgtgtcagccaatcacattctggatgtcggctcccgtgtccgacgggggcg cagcggctattgtgtgtagtgaggactttgtaaggaggcatgggctggaggacaaggctgtggagatcatagcccaacac atggtaacagacaccaaggaatcattccaacaaagcttcatggatctgtctggctataagatggcacagagggcagcaca gctctgttaccaggataccaagctgtcacctagcgacgtggatgtactggaggtacatgactgcttctcttgtaatgaga tgtttatgtatgaggcgttacagctcgccagggaaggggagggggccgagttaatcaggaatgccaagtggaccaagaac agcaatggaggggagctgtgtgttatgaatggacgctgggtggtcaatccctcaggtggactagaatcaaaagggcatcc cataggcgcaacagataccaagctgtcacctagcgacgtggatgtactggaggtacatgactgcttctcttgtaatgaga tgtttatgtatgaggcgttacagctcgccagggaaggggagggggccgagttaatcaggaatgccaagtggaccaagaac agcaatggaggggagctgtgtgttatgaatggacgctgggtggtcaatccctcaggtggactagaatcaaaagggcatcc cataggcgcaacaggtttggctcaatgtgcagagttggtatggcagctccgtgatcaggctggcaaaagacaagtggagg gagcaaaggttgccatgcaacataattatggtattggtggcgctgctgtagtaactatgtacagacgatacaaagaccaa gaacaacgtttgttggctcgattgtga |
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Protein
| Protein ID | pfu_aug2.0_14.1_13388.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13388.t1 MADEYGKIINCLNSTQSQDALTDAGISYDKIQAVVASYCYGEPTCGQRAAYELGLSGVPIFNVNNNCSSGSSALMLARRL IQSGLEDCVLALGFEKMERGLSERYNDRTSPVKPQMDHMVSIGAEPGLVQPHLNTITSDVVKLYAYAAREYMKKYPDTKV SDFVNIAYKNHRHSVNNPKATIQKAIPPEVIRSKLPLCQPITFWMSAPVSDGGAAAIVCSEDFVRRHGLEDKAVEIIAQH MVTDTKESFQQSFMDLSGYKMAQRAAQLCYQDTKLSPSDVDVLEVHDCFSCNEMFMYEALQLAREGEGAELIRNAKWTKN SNGGELCVMNGRWVVNPSGGLESKGHPIGATDTKLSPSDVDVLEVHDCFSCNEMFMYEALQLAREGEGAELIRNAKWTKN SNGGELCVMNGRWVVNPSGGLESKGHPIGATGLAQCAELVWQLRDQAGKRQVEGAKVAMQHNYGIGGAAVVTMYRRYKDQ EQRLLARL |
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