Gene
| Gene Model ID | pfu_aug2.0_14.1_13391 |
|---|---|
| Locus | scaffold14.1 : 407567 ... 435030 : - |
| To GenomeBrowser | scaffold14.1:407567..435030 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_88910.1_20703 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13391.t1 | 2 | 1 | LRR_8 | 38 | 95 | 2.4e-18 | 65.6 | 5.0e-15 | 5.7e-12 | 45.2 |
| pfu_aug2.0_14.1_13391.t1 | 2 | 1 | LRR_4 | 38 | 75 | 1.4e-10 | 40.5 | 6.1e-09 | 7.0e-06 | 25.5 |
| pfu_aug2.0_14.1_13391.t1 | 2 | 2 | LRR_8 | 66 | 111 | 2.4e-18 | 65.6 | 1.1e-11 | 1.2e-08 | 34.5 |
| pfu_aug2.0_14.1_13391.t1 | 2 | 2 | LRR_4 | 83 | 111 | 1.4e-10 | 40.5 | 8.2e-05 | 0.094 | 12.3 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 1 | ig | 111 | 147 | 1.8e-17 | 63.2 | 0.0019 | 2.2 | 8.4 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 1 | I-set | 119 | 161 | 0.0 | 163.6 | 3.1e-06 | 0.0035 | 17.1 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 1 | V-set | 119 | 162 | 1.1e-14 | 54.2 | 4.2e-06 | 0.0047 | 16.7 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 1 | Ig_2 | 121 | 162 | 1.6e-32 | 111.4 | 0.00024 | 0.27 | 11.3 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 1 | Ig_3 | 126 | 149 | 2.5e-19 | 69.5 | 0.0017 | 1.9 | 9.0 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 2 | I-set | 170 | 256 | 0.0 | 163.6 | 5.5e-21 | 6.3e-18 | 64.4 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 2 | Ig_2 | 170 | 246 | 1.6e-32 | 111.4 | 1.2e-15 | 1.4e-12 | 47.5 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 2 | Ig_3 | 170 | 243 | 2.5e-19 | 69.5 | 1.4e-11 | 1.6e-08 | 34.8 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 2 | V-set | 175 | 244 | 1.1e-14 | 54.2 | 2.9e-05 | 0.033 | 14.0 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 2 | ig | 184 | 241 | 1.8e-17 | 63.2 | 4.7e-10 | 5.4e-07 | 29.6 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 3 | Ig_3 | 259 | 335 | 2.5e-19 | 69.5 | 5.4e-07 | 0.00062 | 20.2 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 3 | I-set | 260 | 348 | 0.0 | 163.6 | 9.8e-19 | 1.1e-15 | 57.2 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 3 | Ig_2 | 260 | 348 | 1.6e-32 | 111.4 | 2.2e-10 | 2.5e-07 | 30.7 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 3 | V-set | 264 | 342 | 1.1e-14 | 54.2 | 1.4e-06 | 0.0016 | 18.2 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 3 | ig | 274 | 332 | 1.8e-17 | 63.2 | 7.2e-07 | 0.00082 | 19.4 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 4 | Ig_2 | 358 | 432 | 1.6e-32 | 111.4 | 6.0e-06 | 0.0068 | 16.5 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 4 | I-set | 363 | 437 | 0.0 | 163.6 | 7.0e-07 | 0.0008 | 19.2 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 4 | V-set | 365 | 390 | 1.1e-14 | 54.2 | 1.2 | 1400.0 | -0.9 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 4 | ig | 368 | 421 | 1.8e-17 | 63.2 | 0.97 | 1100.0 | -0.2 |
| pfu_aug2.0_14.1_13391.t1 | 4 | 4 | Ig_3 | 403 | 424 | 2.5e-19 | 69.5 | 0.74 | 850.0 | 0.5 |
| pfu_aug2.0_14.1_13391.t1 | 1 | 1 | An_peroxidase | 575 | 1125 | 0.0 | 594.0 | 0.0 | 0.0 | 593.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13391.t1 | gi|556980841|ref|XP_005997034.1| | PREDICTED: peroxidasin homolog [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_14.1_13391.t1 | gi|564248959|ref|XP_006263561.1| | PREDICTED: peroxidasin homolog [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_14.1_13391.t1 | gi|557280051|ref|XP_006023035.1| | PREDICTED: peroxidasin homolog [Alligator sinensis] | 0.0 |
| pfu_aug2.0_14.1_13391.t1 | gi|556971223|ref|XP_005994048.1| | PREDICTED: peroxidasin homolog [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_14.1_13391.t1 | gi|697034697|ref|XP_009579620.1| | PREDICTED: peroxidasin homolog, partial [Fulmarus glacialis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13391.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13391.t1 atgataagatcacaggaaccgtgtccgagaaagtgtatttgtctcagagacaccgttcgatgtatgtttcagcagctgag tgagatacccccctccataccctcagaaacaacagtactagatctgagatttaatatcattcaagacattccacgcaatt ccttggcaggattaaacaagctccataccatattactcaataataatcatatagaaagaattcagaatggtgcttttaat ggtcttccacagttaagacatttatttttatataaaaatgacatagaaaggatagatagacaagcgttcagcagcttaac caatctacgacaatttgttgaacttaaccctgatgatgatcggatctctgtcttaaatgacggcactttgacgattaagg atactcagatgacagacaggggagactaccagtgtgtggctaggagtgttaatggagaaatacgcaccaacaaagtacag cttacatatatcaataacccagaacagccccagctgaccagaactccacaagatgttatagtgccgtcaggagacacagc taccttcacatgtatagctaggggattccccagacctacagttacctggcaacacaatggtgtgaccttgttgcctagca gcagggttgtcatagatcccaggggtcagctacagataaggaatgttgatgtatcacagcagggaacatatgtgtgtagg gccactaatgatgctggattttccatcgcagaagccaggctgattgtaagtgaacctccccgtttatctgtgagccctga ggatcagagtgtaacggagggtcagacggctatatttaggtgtgacttcacaggaagcggacagataaatgttacatggg ttaatggagcccaggaagaattacctacaaacagacgtcatcagatcctggaggaagggagagcactgcgtatcgtacaa acaaagagatctgatagggggctgtatacatgtaggggaagtaaccaagctggggttacagagggtacagcagaactatc tgttaatattcagttatcaaacaatgtgctaaacagagaatttgaggtggaaacataccctggaaatgacatcattctcc aatgtgaccctgatgaccccaacattccgacgcggtggatcaaggacggagtggctctcagaagcggggctaagtactca ctacaagggggacgacttgtaatcaggaccgtggggaactcagactttgggagatatgaatgcttcccggagaacactgt tgggtttgcaagaaatgttataactttgcagaacagtggacgacaaaggaatattcaaattgaccagggtacgtatttgg gcagccagtatgtgaacagtgccgtacgtcaggcaactaacgaggtgaaccaggccataaaccaaaccatgcgtaacttg tttgacagaagccgacagcatacggtacaggatctgatcgcgatattccgttatccgtctgctgaggcgttagaactagc acgagcagaggagatctttgagcagacgttacagatcatacacagacacgtcagggacggtcatgaatacaacatatcag actccgttggatcatacaaagagattttatcacctggtcatctagagctcatagctaacatgtccggctgtttcccagac cccagggtagttagatgctcagagatgtgctttcataaaaaattcagatcaatggacggcatttgtaacaatctacagag tccaatgtggggcgcatcagtgataccactcaaacgtctacaacaacctatatatgaaaatggcttcaatactccagttg gttgggagagaacaaggatctacaataactaccacctacccagcccccgtctagtgtcctcgtttctgatgtccacagac catgtgacagaggatgagaagaatactcacatgttaatgcagtggggtcagtttgtagaccatgacatggatttgacccc acagtccgtcagtaatgctcgattcagtgatggtcggtactgtaacgagacgtgtgagaatcaatacccctgcttcccga tcactgtgccgcgcagtgacacgcgtatacagaaccatgcatgtctgggtttctcacgaagtagtgctatgtgcaacaca ggaagcacatctgttttctataaaacttttacaaagagggagcagataaatgctgttacggcatttattgacggtagttc tatttatggtagtagtgattttgaatctcagagacttcgagaatttactaatggaagaggtctgatgagggaaggtgttc tgacacagggtggtaagaggttattaccatttgataccggtaatttcctacatcactttgactgtcagttagatcccagt aagcgacatgtgccgtgtttccgtgccggtgataacagagtaaacgagcagctagccctcacagccatgcacacactgtg gatgagacagcacaaccacattgctacagaattgttaggaatcaatcctcactgggacggtaacatgctattccatgaga caaggaaaataattggtgccctgatgcagcatattacatatacacagtggctgccacacattcttggcccctcaggcatg cagctacttggggaatacaagggatataaccctactgtagacccatcaattagcaacgaatttgctactgccgctatgag atttggacattctttggtacagccaattattttccgattaaacgagagtttgcagccaatcccagaaggcaatctgcctc tacacaaagctttcttctccccatataagatattagaggagggcggaatagatccgttgttgagaggactgtacggaatg tcagccaagaagaggatgccagacgaggtcatgaactctgaactaacggagaaattattttcattagctaatgtcgtggg tcaggatttggcatcactgaatattcaaagaggacgagaccatggtttaccattctataaccagtatcgagtgctatgta atctgaccagggcctccacatttgatgatttcagaagggagatgcctgatcaggctgtcagagataaacttctggctcta tacggtcatccagataacgtagatttgtttgtgggtggtatggcagagcagccgttgcctgggggtaaggttggacctac attcctgtgtatattggtggatcagttcagacgactcagggatggtgataggttttggtacgagaaccctgatgtatttg aatcgacccagctagcagaaataaaacagatcacattgtcccgtgttatatgtgacagcagtgatggtatagaaaaggtt caaaaggatacatttattagagctgagagacctgctgactacctcctttgtaaagatataccaaagatgaattttaagat atggtccgattgttgtacagattgtggtaaaactggtgactttcaatctctgatcaaccacttccgtcagtcatctagga accagttttctctcagagaggaccgcgaccatataatacgaagcaactccaacacaaacactaacattgatccaatacgg agtaactctatacccatgccaagctatatcaatgaccaaatgcagctgttcaatcaacaaatgaccaactttgattctaa agtcggaggaatggaaaatacaattagcaaattaacaaaaactatcacaaagttaaaacgaaagatgagaaaaatgacaa agatgatgcagagaacaatgaatccattagtttgtatagataataaaggacgcaaacgcaaggagaaggaggtgtggaaa attaacagttgtcgaacatgtagatgtcgacaatcgatcattagattgatgagtgcaaggattttgtgtaatgagcgaga gagtttacagcaatatgaattaaaggattttgacagcgagtcaagacttgcatcaactgtagaaaatagagaattgtga |
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Protein
| Protein ID | pfu_aug2.0_14.1_13391.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13391.t1 MIRSQEPCPRKCICLRDTVRCMFQQLSEIPPSIPSETTVLDLRFNIIQDIPRNSLAGLNKLHTILLNNNHIERIQNGAFN GLPQLRHLFLYKNDIERIDRQAFSSLTNLRQFVELNPDDDRISVLNDGTLTIKDTQMTDRGDYQCVARSVNGEIRTNKVQ LTYINNPEQPQLTRTPQDVIVPSGDTATFTCIARGFPRPTVTWQHNGVTLLPSSRVVIDPRGQLQIRNVDVSQQGTYVCR ATNDAGFSIAEARLIVSEPPRLSVSPEDQSVTEGQTAIFRCDFTGSGQINVTWVNGAQEELPTNRRHQILEEGRALRIVQ TKRSDRGLYTCRGSNQAGVTEGTAELSVNIQLSNNVLNREFEVETYPGNDIILQCDPDDPNIPTRWIKDGVALRSGAKYS LQGGRLVIRTVGNSDFGRYECFPENTVGFARNVITLQNSGRQRNIQIDQGTYLGSQYVNSAVRQATNEVNQAINQTMRNL FDRSRQHTVQDLIAIFRYPSAEALELARAEEIFEQTLQIIHRHVRDGHEYNISDSVGSYKEILSPGHLELIANMSGCFPD PRVVRCSEMCFHKKFRSMDGICNNLQSPMWGASVIPLKRLQQPIYENGFNTPVGWERTRIYNNYHLPSPRLVSSFLMSTD HVTEDEKNTHMLMQWGQFVDHDMDLTPQSVSNARFSDGRYCNETCENQYPCFPITVPRSDTRIQNHACLGFSRSSAMCNT GSTSVFYKTFTKREQINAVTAFIDGSSIYGSSDFESQRLREFTNGRGLMREGVLTQGGKRLLPFDTGNFLHHFDCQLDPS KRHVPCFRAGDNRVNEQLALTAMHTLWMRQHNHIATELLGINPHWDGNMLFHETRKIIGALMQHITYTQWLPHILGPSGM QLLGEYKGYNPTVDPSISNEFATAAMRFGHSLVQPIIFRLNESLQPIPEGNLPLHKAFFSPYKILEEGGIDPLLRGLYGM SAKKRMPDEVMNSELTEKLFSLANVVGQDLASLNIQRGRDHGLPFYNQYRVLCNLTRASTFDDFRREMPDQAVRDKLLAL YGHPDNVDLFVGGMAEQPLPGGKVGPTFLCILVDQFRRLRDGDRFWYENPDVFESTQLAEIKQITLSRVICDSSDGIEKV QKDTFIRAERPADYLLCKDIPKMNFKIWSDCCTDCGKTGDFQSLINHFRQSSRNQFSLREDRDHIIRSNSNTNTNIDPIR SNSIPMPSYINDQMQLFNQQMTNFDSKVGGMENTISKLTKTITKLKRKMRKMTKMMQRTMNPLVCIDNKGRKRKEKEVWK INSCRTCRCRQSIIRLMSARILCNERESLQQYELKDFDSESRLASTVENREL |
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