Gene
| Gene Model ID | pfu_aug2.0_14.1_13393 |
|---|---|
| Locus | scaffold14.1 : 450862 ... 463630 : - |
| To GenomeBrowser | scaffold14.1:450862..463630 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_178.1_36343 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13393.t3 | 3 | 1 | Laminin_G_2 | 85 | 210 | 9.2e-36 | 122.7 | 2.8e-17 | 8.3e-14 | 51.7 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 1 | Laminin_G_1 | 85 | 209 | 5.7e-19 | 68.4 | 5.6e-11 | 1.7e-07 | 31.3 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 1 | Laminin_G_3 | 93 | 203 | 5.2e-06 | 26.7 | 2.5e-07 | 0.00073 | 19.7 |
| pfu_aug2.0_14.1_13393.t3 | 2 | 1 | EGF | 234 | 259 | 3.2e-09 | 36.5 | 1.0e-08 | 3.1e-05 | 23.8 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 2 | Laminin_G_2 | 306 | 458 | 9.2e-36 | 122.7 | 8.6e-16 | 2.6e-12 | 46.9 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 2 | Laminin_G_1 | 306 | 460 | 5.7e-19 | 68.4 | 1.3e-07 | 0.00037 | 20.5 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 2 | Laminin_G_3 | 355 | 410 | 5.2e-06 | 26.7 | 0.062 | 180.0 | 2.2 |
| pfu_aug2.0_14.1_13393.t3 | 2 | 2 | EGF | 480 | 513 | 3.2e-09 | 36.5 | 7.1e-07 | 0.0021 | 17.9 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 3 | Laminin_G_3 | 540 | 624 | 5.2e-06 | 26.7 | 0.19 | 570.0 | 0.6 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 3 | Laminin_G_2 | 564 | 676 | 9.2e-36 | 122.7 | 9.2e-08 | 0.00027 | 20.9 |
| pfu_aug2.0_14.1_13393.t3 | 3 | 3 | Laminin_G_1 | 571 | 676 | 5.7e-19 | 68.4 | 3.2e-05 | 0.094 | 12.7 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13393.t1 atgatgcaggagtggagatcagatgagggttataacaaggtgaatgtacagcttcctataactgaggtgacagtactaca gaacacggatgtcgtagatggtgatagtaacggtacactaacactgggacctctagaatgctgggctaatgatgaatcgt tgtccagtatgtctgtgacgtttaaatcaccatttgcctctctgcagctgaagggaatggatccttctgagtcagggatt ctgagttttagcttccgtacatttagttcctcagctacgttactacaccaaaccggagattccgataataacaacaactt taaaattacactagtagcaggtcaacacctacagtttgattttgaaattagtggatctgtcatgaagagtgacttctata cagacttgcctataaatgatggagaatggcatctggttataatagagatcaacaatggtcaaattagatgttccttggat ctgcagcaaaacatactggatgtgccgagtgtgccagatggaagtctgcagtttgccgggccgttattcttgggagcccc atacaacataggagatcccacccagattccaggtttagtaggttgtgtgaaaggtatgagatataacggagccattcacg atctgacagcagaagtggatcagagtatgacagacatagtacaaggctgtacaccatactgtaagattatgaagccgtgt atgaacaatgccacatgtgtagagaaatgggacggttacgagtgtgaatgtactaacaagtgggctcactctggacacaa ttgtgaaatcaatataaatgagaatgtcgctacattttctggttctccatcttcctaccttgacataagcgtgggaaggg accctcggctaattgactccacaatattacttagcttccggagccgagttcaccgcggacttctcttctacatgtatgat gaccttaataacttcatacagctggaggtgaagacaggctaccgacttgtactcagctttaatcagtttcaaacaattat gtctcgggaagtcaaaattcctgactccgaacattcaaaggacatagcggacggggagtggaagcaggttgtcatagaaa ccctaaataacggaaacatcactaaattgacggtgaatgatgatgaaagccagaggacgatttttccgttcaggagattc aaacttacaaactatttgcaaaatccatttacaagtaaagagactatagtacctgaacgtggaccccgcccaaagccacc ctttgtacgtatactggtaggaggggctgatgttaacagtacatcactacctaattttaaaggctgtatacgaggtctga aagtcggagatcagcttattgacctgcaaagtaatgctaaacagcatccagatgtagaacccgagtgtttatctggctgc gcctccacaccatgtaagaattctggtatctgcacagagagatggggtagtcaggactttgagtgtaattgtgacaacag tgattacacaggaaaaacttgtgatatggaggcatctggtgtatttgatggtggtaatgctgtagaatatcggtaccggc cgtatggatctgctgtcatgacaacctccgaggaattctcgtttgttttcaagtccaactgcaccgaggagaagtggatg ctgcttgccttgtggtgggctagcaaggaacccagtcatggatacatagtagttactctacatcccaaggacggcatcat cgtacagtggggaatggacactgtcaataggttattcaatgaaaaggggaaattttgtgatggaacagcacacagattta catatcgtcgaaactcgactacgatctacataggggtgacccctgttggcagtattgacagaacccattacggagctgtg acgccaggaacgcccatgaaaggactggacactgttatactaggaggcatagtcaacagtcataatctacagaatgtgga agttttaacatggccaaatgtactcaactttactggatgtctatctgaaggggacacaaccttctttgggacagtaggcc aaaagatgtga |
|
| Transcript ID | pfu_aug2.0_14.1_13393.t2 |
| Definition | - |
>pfu_aug2.0_14.1_13393.t2 atgatgcaggagtggagatcagatgagggttataacaaggtgaatgtacagcttcctataactgaggtgacagtactaca gaacacggatgtcgtagatggtgatagtaacggtacactaacactgggacctctagaatgctgggctaatgatgaatcgt tgtccagtatgtctgtgacgtttaaatcaccatttgcctctctgcagctgaagggaatggatccttctgagtcagggatt ctgagttttagcttccgtacatttagttcctcagctacgttactacaccaaaccggagattccgataataacaacaactt taaaattacactagtagcaggtcaacacctacagtttgattttgaaattagtggatctgtcatgaagagtgacttctata cagacttgcctataaatgatggagaatggcatctggttataatagagatcaacaatggtcaaattagatgttccttggat ctgcagcaaaacatactggatgtgccgagtgtgccagatggaagtctgcagtttgccgggccgttattcttgggagcccc atacaacataggagatcccacccagattccaggtttagtaggttgtgtgaaaggtatgagatataacggagccattcacg atctgacagcagaagtggatcagagtatgacagacatagtacaaggctgtacaccatactgtaagattatgaagccgtgt atgaacaatgccacatgtgtagagaaatgggacggttacgagtgtgaatgtactaacaagtgggctcactctggacacaa ttgtgaaatcaatataaatgagaatgtcgctacattttctggttctccatcttcctaccttgacataagcgtgggaaggg accctcggctaattgactccacaatattacttagcttccggagccgagttcaccgcggacttctcttctacatgtatgat gaccttaataacttcatacagctggaggtgaagacaggctaccgacttgtactcagctttaatcagtttcaaacaattat gtctcgggaagtcaaaattcctgacatagcggacggggagtggaagcaggttgtcatagaaaccctaaataacggaaaca tcactaaattgacggtgaatgatgatgaaagccagaggacgatttttccgttcaggagattcaaacttacaaactatttg caaaatccatttacaagtaaagagactatagtacctgaacgtggaccccgcccaaagccaccctttgtacgtatactggt aggaggggctgatgttaacagtacatcactacctaattttaaaggctgtatacgaggtctgaaagtcggagatcagctta ttgacctgcaaagtaatgctaaacagcatccagatgtagaacccgagtgtttatctggctgcgcctccacaccatgtaag aattctggtatctgcacagagagatggggtagtcaggactttgagtgtaattgtgacaacagtgattacacaggaaaaac ttgtgatatggaggcatctggtgtatttgatggtggtaatgctgtagaatatcggtaccggccgtatggatctgctgtca tgacaacctccgaggaattctcgtttgttttcaagtccaactgcaccgaggagaagtggatgctgcttgccttgtggtgg gctagcaaggaacccagtcatggatacatagtagttactctacatcccaaggacggcatcatcgtacagtggggaatgga cactgtcaataggttattcaatgaaaaggggaaattttgtgatggaacagcacacagatttacatatcgtcgaaactcga ctacgatctacataggggtgacccctgttggcagtattgacagaacccattacggagctgtgacgccaggaacgcccatg aaaggactggacactgttatactaggaggcatagtcaacagtcataatctacagaatgtggaagttttaacatggccaaa tgtactcaactttactggatgtctatctgaaggggacacaaccttctttgggacagtaggccaaaagatgtga |
|
| Transcript ID | pfu_aug2.0_14.1_13393.t3 |
| Definition | - |
>pfu_aug2.0_14.1_13393.t3 atgatgcaggagtggagatcagatgagggttataacaaggtgaatgtacagcttcctataactgaggtgacagtactaca gaacacggatgtcgtagatggtgatagtaacggtacactaacactgggacctctagaatgctgggctaatgatgaatcgt tgtccagtatgtctgtgacgtttaaatcaccatttgcctctctgcagctgaagggaatggatccttctgagtcagggatt ctgagttttagcttccgtacatttagttcctcagctacgttactacaccaaaccggagattccgataataacaacaactt taaaattacactagtagcaggtcaacacctacagtttgattttgaaattagtggatctgtcatgaagagtgacttctata cagacttgcctataaatgatggagaatggcatctggttataatagagatcaacaatggtcaaattagatgttccttggat ctgcagcaaaacatactggatgtgccgagtgtgccagatggaagtctgcagtttgccgggccgttattcttgggagcccc atacaacataggagatcccacccagattccaggtttagtaggttgtgtgaaaggtatgagatataacggagccattcacg atctgacagcagaagtggatcagagtatgacagacatagtacaaggctgtacaccatactgtaagattatgaagccgtgt atgaacaatgccacatgtgtagagaaatgggacggttacgagtgtgaatgtactaacaagtgggctcactctggacacaa ttgtgaaatcaatataaatgagaatgtcgctacattttctggttctccatcttcctaccttgacataagcgtgggaaggg accctcggctaattgactccacaatattacttagcttccggagccgagttcaccgcggacttctcttctacatgtatgat gaccttaataacttcatacagctggaggtgaagacaggctaccgacttgtactcagctttaatcagtttcaaacaattat gtctcgggaagtcaaaattcctgactccgaacattcaaaggacatagcggacggggagtggaagcaggttgtcatagaaa ccctaaataacggaaacatcactaaattgacggtgaatgatgatgaaagccagaggacgatttttccgttcaggagattc aaacttacaaactatttgcaaaatccatttacaagtaaagagactatagtacctgaacgtggaccccgcccaaagccacc ctttgtacgtatactggtaggaggggctgatgttaacagtacatcactacctaattttaaaggctgtatacgaggtctga aagtcggagatcagcttattgacctgcaaagtaatgctaaacagcatccagatgtagaacccgagtgtttatctggctgc gcctccacaccatgtaagaattctggtatctgcacagagagatggggtagtcaggactttgagtgtaattgtgacaacag tgattacacaggaaaaacttgtgatatggaggcatctggtgtatttgatggtggtaatgctgtagaatatcggtaccggc cgtatggatctgctgtcatgacaacctccgaggaattctcgtttgttttcaagtccaactgcaccgaggagaagtggatg ctgcttgccttgtggtgggctagcaaggaacccagtcatggatacatagtagttactctacatcccaaggacggcatcat cgtacagtggggaatggacactgtcaataggttattcaatgaaaaggggaaattttgtgatggaacagcacacagattta catatcgtcgaaactcgactacgatctacatagggattgacagaacccattacggagctgtgacgccaggaacgcccatg aaaggactggacactgttatactaggaggcatagtcaacagtcataatctacagaatgtggaagttttaacatggccaaa tgtactcaactttactggatgtctatctgaaggggacacaaccttctttgggacagtaggccaaaagatgtga |
|
Protein
| Protein ID | pfu_aug2.0_14.1_13393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13393.t1 MMQEWRSDEGYNKVNVQLPITEVTVLQNTDVVDGDSNGTLTLGPLECWANDESLSSMSVTFKSPFASLQLKGMDPSESGI LSFSFRTFSSSATLLHQTGDSDNNNNFKITLVAGQHLQFDFEISGSVMKSDFYTDLPINDGEWHLVIIEINNGQIRCSLD LQQNILDVPSVPDGSLQFAGPLFLGAPYNIGDPTQIPGLVGCVKGMRYNGAIHDLTAEVDQSMTDIVQGCTPYCKIMKPC MNNATCVEKWDGYECECTNKWAHSGHNCEININENVATFSGSPSSYLDISVGRDPRLIDSTILLSFRSRVHRGLLFYMYD DLNNFIQLEVKTGYRLVLSFNQFQTIMSREVKIPDSEHSKDIADGEWKQVVIETLNNGNITKLTVNDDESQRTIFPFRRF KLTNYLQNPFTSKETIVPERGPRPKPPFVRILVGGADVNSTSLPNFKGCIRGLKVGDQLIDLQSNAKQHPDVEPECLSGC ASTPCKNSGICTERWGSQDFECNCDNSDYTGKTCDMEASGVFDGGNAVEYRYRPYGSAVMTTSEEFSFVFKSNCTEEKWM LLALWWASKEPSHGYIVVTLHPKDGIIVQWGMDTVNRLFNEKGKFCDGTAHRFTYRRNSTTIYIGVTPVGSIDRTHYGAV TPGTPMKGLDTVILGGIVNSHNLQNVEVLTWPNVLNFTGCLSEGDTTFFGTVGQKM |
|
| Protein ID | pfu_aug2.0_14.1_13393.t2 |
| Definition | - |
>pfu_aug2.0_14.1_13393.t2 MMQEWRSDEGYNKVNVQLPITEVTVLQNTDVVDGDSNGTLTLGPLECWANDESLSSMSVTFKSPFASLQLKGMDPSESGI LSFSFRTFSSSATLLHQTGDSDNNNNFKITLVAGQHLQFDFEISGSVMKSDFYTDLPINDGEWHLVIIEINNGQIRCSLD LQQNILDVPSVPDGSLQFAGPLFLGAPYNIGDPTQIPGLVGCVKGMRYNGAIHDLTAEVDQSMTDIVQGCTPYCKIMKPC MNNATCVEKWDGYECECTNKWAHSGHNCEININENVATFSGSPSSYLDISVGRDPRLIDSTILLSFRSRVHRGLLFYMYD DLNNFIQLEVKTGYRLVLSFNQFQTIMSREVKIPDIADGEWKQVVIETLNNGNITKLTVNDDESQRTIFPFRRFKLTNYL QNPFTSKETIVPERGPRPKPPFVRILVGGADVNSTSLPNFKGCIRGLKVGDQLIDLQSNAKQHPDVEPECLSGCASTPCK NSGICTERWGSQDFECNCDNSDYTGKTCDMEASGVFDGGNAVEYRYRPYGSAVMTTSEEFSFVFKSNCTEEKWMLLALWW ASKEPSHGYIVVTLHPKDGIIVQWGMDTVNRLFNEKGKFCDGTAHRFTYRRNSTTIYIGVTPVGSIDRTHYGAVTPGTPM KGLDTVILGGIVNSHNLQNVEVLTWPNVLNFTGCLSEGDTTFFGTVGQKM |
|
| Protein ID | pfu_aug2.0_14.1_13393.t3 |
| Definition | - |
>pfu_aug2.0_14.1_13393.t3 MMQEWRSDEGYNKVNVQLPITEVTVLQNTDVVDGDSNGTLTLGPLECWANDESLSSMSVTFKSPFASLQLKGMDPSESGI LSFSFRTFSSSATLLHQTGDSDNNNNFKITLVAGQHLQFDFEISGSVMKSDFYTDLPINDGEWHLVIIEINNGQIRCSLD LQQNILDVPSVPDGSLQFAGPLFLGAPYNIGDPTQIPGLVGCVKGMRYNGAIHDLTAEVDQSMTDIVQGCTPYCKIMKPC MNNATCVEKWDGYECECTNKWAHSGHNCEININENVATFSGSPSSYLDISVGRDPRLIDSTILLSFRSRVHRGLLFYMYD DLNNFIQLEVKTGYRLVLSFNQFQTIMSREVKIPDSEHSKDIADGEWKQVVIETLNNGNITKLTVNDDESQRTIFPFRRF KLTNYLQNPFTSKETIVPERGPRPKPPFVRILVGGADVNSTSLPNFKGCIRGLKVGDQLIDLQSNAKQHPDVEPECLSGC ASTPCKNSGICTERWGSQDFECNCDNSDYTGKTCDMEASGVFDGGNAVEYRYRPYGSAVMTTSEEFSFVFKSNCTEEKWM LLALWWASKEPSHGYIVVTLHPKDGIIVQWGMDTVNRLFNEKGKFCDGTAHRFTYRRNSTTIYIGIDRTHYGAVTPGTPM KGLDTVILGGIVNSHNLQNVEVLTWPNVLNFTGCLSEGDTTFFGTVGQKM |
|