Gene
| Gene Model ID | pfu_aug2.0_14.1_13394 |
|---|---|
| Locus | scaffold14.1 : 463682 ... 495610 : - |
| To GenomeBrowser | scaffold14.1:463682..495610 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_178.1_36343 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13394.t1 | 3 | 1 | Laminin_G_2 | 70 | 210 | 5.0e-38 | 130.0 | 6.6e-15 | 1.4e-11 | 44.5 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 1 | Laminin_G_1 | 70 | 210 | 9.4e-26 | 90.3 | 2.0e-09 | 4.3e-06 | 26.7 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 1 | Laminin_G_3 | 119 | 164 | 1.2e-07 | 32.1 | 0.2 | 420.0 | 1.0 |
| pfu_aug2.0_14.1_13394.t1 | 2 | 1 | DUF1080 | 303 | 414 | 2.3e-06 | 27.5 | 0.00012 | 0.25 | 11.2 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 2 | Laminin_G_2 | 308 | 437 | 5.0e-38 | 130.0 | 3.9e-20 | 8.3e-17 | 61.4 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 2 | Laminin_G_1 | 308 | 439 | 9.4e-26 | 90.3 | 2.1e-16 | 4.5e-13 | 49.3 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 2 | Laminin_G_3 | 360 | 437 | 1.2e-07 | 32.1 | 1.3e-08 | 2.7e-05 | 24.4 |
| pfu_aug2.0_14.1_13394.t1 | 2 | 2 | DUF1080 | 491 | 579 | 2.3e-06 | 27.5 | 1.7e-05 | 0.035 | 13.9 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 3 | Laminin_G_2 | 497 | 622 | 5.0e-38 | 130.0 | 3.0e-08 | 6.4e-05 | 22.9 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 3 | Laminin_G_3 | 550 | 616 | 1.2e-07 | 32.1 | 0.0093 | 20.0 | 5.4 |
| pfu_aug2.0_14.1_13394.t1 | 3 | 3 | Laminin_G_1 | 557 | 623 | 9.4e-26 | 90.3 | 0.00015 | 0.32 | 11.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13394.t1 | gi|759033027|ref|XP_011339247.1| | PREDICTED: contactin-associated protein-like 5 isoform X9 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_14.1_13394.t1 | gi|759033029|ref|XP_011339333.1| | PREDICTED: contactin-associated protein-like 5 isoform X10 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_14.1_13394.t1 | gi|759033017|ref|XP_011338826.1| | PREDICTED: contactin-associated protein-like 4 isoform X6 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_14.1_13394.t1 | gi|759033015|ref|XP_011338747.1| | PREDICTED: contactin-associated protein-like 4 isoform X5 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13394.t1 atgactgtaggatggtgcagtaactccagaatggaacggaataacttcgcctggatattagggctacaatttctatctgt gatattattgaatgacgtagtgctttgtcagactgacgtcactgccggttggacgttttcttccggtggtttcttggcgt tttcaccgaatcttaccgcgcgtgacaatcagcggataggattaagttttaggacgaaggaacctcatggtttattattt tgtcatattccaaaggattataatagaacagaattcccgttgttacaaagttataaattttgtgcggaattataccgagg atatgtacggattgtatatgtactgaatgactttacctacaatctgactctcagtaaagcaataaacgacgatagatggc atgacatagaagtattccttaacacgaccagcggtatcctagaggtagtattggaccgtcaaccaaaacagacagatata ctcaaagcctacctccaaaacagatataacccaaagtctatactagactggcggaggctggggtctgtcgtgttatatgg gggacttgggaaatcaaaatcaccatttacatataaccagttcataggatgtatgaggaatttgaagtaccttcacaatg gtgtattctgggaaataaggacatttagtaatgtatctgacgtcacacaaggctgcatagacagatgtgaacaggacaat ccgtgtgaggggggagggatgtgtattaacaagtatgacaaggctgtgtgtgactgctttgaaacgggtcgtgaggggga cacatgccaaatactagaccccacagaggtgacgctacaaggatttgagtggttgacctttgacctttatcagcgaccag aggacagagtagctatggaaaacagcagatacagtttacagttcaagtctgagcgaggatcaggagtgttactttacgct gtaggtaatatagctgacggtaggactggacacacacacgttatagcctcagtacataatggagtggtcaaggcatccgt agcgttcagtgaccaacacaaactagaacaggaaatgggcatgtctgtcgatgataatcaatggcacaatctcaccatca tacatagaaaaacggtggtagaattttacctggacggagtgatgtatcgcaaggtctcaaatacaagtaactactacctc aacctggaccctaaggtctatattggcgggggagataatctggtcaaaactgtcggtttacaggtaacaaggaacttcgt aggatgtctgaagaatgtgtatatcaatgatgcctcagtgctgtaccagctgagcactaacgtcaccacatcacggtact atggtggtgaccaggtgcagttcggttgtagtaaggtagagaatgtatccatgactttccccaagtctggtaccacattg cttctgaatggttacacagggaaattcctcaaagtgtcatttgacttgcgtaccgtgagagaacagtctatcatatttta tacacagctggaaaccatcacaccagagggaaatatggaatatcttgtctttgaggtttggattcatgacagaatgcctc tgatgaagtttataccgttatactctgataaacgtgtgaagacatccagagttccaatggaagtcagcaacaatcagtgg aattctctcagcatcattgtcactggaagtcaggtgaaggtggcagctaattacgtagttaaatcttatgactttgaggg aacagttatgtctgctggtcatatcgttatagggtacggcagtagaaattatgatgtccatgatggttttgtgggttgtt tgaaaaatttagttatcaacggtgaagattttgaccccatagagaggttaaactctgcccctccccccggcgacatcatc agtggagtgttcatggacagctgtcacctaatagattactgccaggacacattgccatgtcaacatcatggaaagtgcct gtctgattggatgggtgtgtcatgtgactgctcaaggacagattatatgggaaaaacatgtcaattcccaaagtacagga cgagctgtgacggttactaccaagcagggtcccgtgtatcgggagtatatatcatagatgtcgatggtgatggtccactg aacgccacttatgtccagtgcattatgggataccagcatgatgatgaactgtttggtaaaactgtggttgaaaataactt agtcccagaaacgcagataagaggagatgaaatggcagatatgagaatgatcataaactatagggagttgtcattaaagc acctgttgaatctgacatccaaatctgagtggtgccaacagaaaatacaatataactgttataattctcctctaagctca aaaacaaaatttgaatactag |
|
Protein
| Protein ID | pfu_aug2.0_14.1_13394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13394.t1 MTVGWCSNSRMERNNFAWILGLQFLSVILLNDVVLCQTDVTAGWTFSSGGFLAFSPNLTARDNQRIGLSFRTKEPHGLLF CHIPKDYNRTEFPLLQSYKFCAELYRGYVRIVYVLNDFTYNLTLSKAINDDRWHDIEVFLNTTSGILEVVLDRQPKQTDI LKAYLQNRYNPKSILDWRRLGSVVLYGGLGKSKSPFTYNQFIGCMRNLKYLHNGVFWEIRTFSNVSDVTQGCIDRCEQDN PCEGGGMCINKYDKAVCDCFETGREGDTCQILDPTEVTLQGFEWLTFDLYQRPEDRVAMENSRYSLQFKSERGSGVLLYA VGNIADGRTGHTHVIASVHNGVVKASVAFSDQHKLEQEMGMSVDDNQWHNLTIIHRKTVVEFYLDGVMYRKVSNTSNYYL NLDPKVYIGGGDNLVKTVGLQVTRNFVGCLKNVYINDASVLYQLSTNVTTSRYYGGDQVQFGCSKVENVSMTFPKSGTTL LLNGYTGKFLKVSFDLRTVREQSIIFYTQLETITPEGNMEYLVFEVWIHDRMPLMKFIPLYSDKRVKTSRVPMEVSNNQW NSLSIIVTGSQVKVAANYVVKSYDFEGTVMSAGHIVIGYGSRNYDVHDGFVGCLKNLVINGEDFDPIERLNSAPPPGDII SGVFMDSCHLIDYCQDTLPCQHHGKCLSDWMGVSCDCSRTDYMGKTCQFPKYRTSCDGYYQAGSRVSGVYIIDVDGDGPL NATYVQCIMGYQHDDELFGKTVVENNLVPETQIRGDEMADMRMIINYRELSLKHLLNLTSKSEWCQQKIQYNCYNSPLSS KTKFEY |
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