Gene
| Gene Model ID | pfu_aug2.0_14.1_13403 |
|---|---|
| Locus | scaffold14.1 : 747736 ... 772849 : - |
| To GenomeBrowser | scaffold14.1:747736..772849 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_28466.1_11906 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13403.t1 | 3 | 1 | Ldl_recept_a | 176 | 212 | 6.2e-10 | 38.8 | 3.4e-13 | 6.2e-10 | 38.8 |
| pfu_aug2.0_14.1_13403.t1 | 7 | 1 | EGF_CA | 178 | 210 | 1.2e-09 | 37.9 | 1.9 | 3400.0 | -1.9 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 1 | Sushi | 183 | 197 | 8.8e-39 | 131.6 | 8.0 | 15000.0 | -3.6 |
| pfu_aug2.0_14.1_13403.t1 | 3 | 1 | CUB | 216 | 324 | 3.99931e-42 | 142.7 | 3.3e-19 | 6.1e-16 | 58.4 |
| pfu_aug2.0_14.1_13403.t1 | 3 | 2 | CUB | 342 | 444 | 3.99931e-42 | 142.7 | 1.8e-08 | 3.3e-05 | 23.9 |
| pfu_aug2.0_14.1_13403.t1 | 3 | 3 | CUB | 448 | 558 | 3.99931e-42 | 142.7 | 1.4e-18 | 2.6e-15 | 56.4 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 2 | Sushi | 562 | 630 | 8.8e-39 | 131.6 | 7.4e-05 | 0.14 | 12.5 |
| pfu_aug2.0_14.1_13403.t1 | 7 | 2 | EGF_CA | 586 | 595 | 1.2e-09 | 37.9 | 1.9 | 3500.0 | -2.0 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 3 | Sushi | 635 | 688 | 8.8e-39 | 131.6 | 6.7e-14 | 1.3e-10 | 41.5 |
| pfu_aug2.0_14.1_13403.t1 | 7 | 3 | EGF_CA | 661 | 670 | 1.2e-09 | 37.9 | 2.8 | 5200.0 | -2.5 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 4 | Sushi | 705 | 741 | 8.8e-39 | 131.6 | 7.8e-10 | 1.4e-06 | 28.4 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 5 | Sushi | 746 | 795 | 8.8e-39 | 131.6 | 3.3e-06 | 0.0061 | 16.8 |
| pfu_aug2.0_14.1_13403.t1 | 7 | 4 | EGF_CA | 765 | 787 | 1.2e-09 | 37.9 | 0.95 | 1800.0 | -1.0 |
| pfu_aug2.0_14.1_13403.t1 | 7 | 5 | EGF_CA | 816 | 857 | 1.2e-09 | 37.9 | 3.2e-10 | 5.9e-07 | 29.3 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 6 | Sushi | 824 | 857 | 8.8e-39 | 131.6 | 6.2 | 12000.0 | -3.3 |
| pfu_aug2.0_14.1_13403.t1 | 3 | 2 | Ldl_recept_a | 830 | 833 | 6.2e-10 | 38.8 | 8.0 | 15000.0 | -5.3 |
| pfu_aug2.0_14.1_13403.t1 | 7 | 6 | EGF_CA | 859 | 886 | 1.2e-09 | 37.9 | 1.6e-08 | 2.9e-05 | 23.9 |
| pfu_aug2.0_14.1_13403.t1 | 3 | 3 | Ldl_recept_a | 862 | 876 | 6.2e-10 | 38.8 | 8.0 | 15000.0 | -5.2 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 7 | Sushi | 928 | 983 | 8.8e-39 | 131.6 | 1.8e-13 | 3.3e-10 | 40.1 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 8 | Sushi | 988 | 1049 | 8.8e-39 | 131.6 | 6.6e-09 | 1.2e-05 | 25.5 |
| pfu_aug2.0_14.1_13403.t1 | 7 | 7 | EGF_CA | 1014 | 1022 | 1.2e-09 | 37.9 | 8.0 | 15000.0 | -4.1 |
| pfu_aug2.0_14.1_13403.t1 | 9 | 9 | Sushi | 1068 | 1113 | 8.8e-39 | 131.6 | 0.0076 | 14.0 | 6.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13403.t1 | gi|195577197|ref|XP_002078459.1| | GD22519 [Drosophila simulans] | 0.0 |
| pfu_aug2.0_14.1_13403.t1 | gi|751476350|ref|XP_011193657.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Bactrocera cucurbitae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13403.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13403.t1 atgaccactctaatcttattcaagaatggacacaataacaaaaaccctgatgtaccacttagttgtccatctggatggac gatttcagacgtgcactgctacaaagtgttcacaaaccctgttacctggctgaatgcaaacagtatatgtaaaagggacg gtggacacctcgttcaacctcgtgatgaactagcaaattcagacatcgggggactggtcgcgtcacaaattgtcggcgaa tactggattgggttgcttgttcaaggagtgaaaaatgtgtcatctcggagtattcaacaaagtcagcttctccaaaatgt ccatggtgtcaacatgtctaacatggaatggtgggaagccaggtgggccgatggtacagacgccacattgtttgaggcat tctgggatatgtcacaaccaaatactacagctggtgactgtgtgtatacaacaaagacgcagggaggaatgtacaggtgg ggagtggacagttgtcagaccaagaaggcatttgtttgtcagagaccaacttgttctcaaggagcctttcattgccatga tggtacatgtgtgaatcagaaatacgtgtgtgatggtgaagcatcgtgtcaggatggctcagatgaaatggattgccctg gccagtgtcggtatatagtcagagggggtaatggtaaaatacagtctcctaactatccatttgaatatggagataacaca aaatgtagctgggtcattgagggaccacagggttcaaatatcagattacagtttctggagttcaatacagagaagcacga tgatttggtgacattactggtgggcggtagaactcccttaacgtctacgtttgtaactcggctgtcaggggtgatgactg gccatagtgtgacatactccagctataataacttctttattgtggtgttcagctccgacataggtgtaaatgggagagga tttcaggcaaactggacagcagtaactacattggaatcatcaagtgtacagaatgttatcgctagatcaagctaccaaga gttaacatcccctctatacaatcaggattacatgtatggtgaggacgtgttttgggtaattaaatcagagcatgccagga atatcattactataaagccatctgacattgacatacacgacggtgattttttaattgtccgagatggcactaatatctat ggacccattcttggggtgtacacatccactgggggaccggattacatcatatctacatgtggcctccgtgtgacatacag cactctgtcccagtacaggagtgagagaaagaggggctttaaactgctgtacagagaaggatgtgatattactgtgacag aagataaaggtgtgatattttctcctgggtatggaatagtgaactatgagaactatcaaaactgttcctggactattgac cttcctgtgtcacgtagagtgaccgttatatttgataatagttttgatgtagaggagggatatgactatctgcagttata tgaaggtttagacagttctggcccacctcttcaccctgggatgggattcactgggactacagccccactccctgtatcat cgaactctggtaaaatgttcatcaacctcaaaactgactctatacgatccaggaaaggctaccaaggaaaattctctata ggatgtcctgttccaaactttaaccagtacaccatagtgacccccagcattgtccactatgactttggtgtggtgttcaa tgtcagctgtcagacaggctacgagtttacatctgaggagttactgagatctgacggtacatcaatagattatatcaccg tggaatgtctgtacggtggaagctggaatgtcaggcgtataccacagtgttcacctaaatattgtggacagcctccatct gttgtcaatggttacatatctacttcaactggagccgtttataccagtactgtcaagtataaatgtatggatggatttac aacttcgggaagtgatgtcatttcttgtaaagcagatggatcttgggattccccgcctttgtgtattaggatatctgatg gtatatatactatacaggagggaacagggtctgactttgcctcctccctactgtactcatgtaacacaggataccagatc agcggagctccaatcttattctgtctaccaaacggaacttggagtgcccctggtcccacttgtatcaaattacagtgcta tgtacccacacttactaacggacatatcactatgtctgggagaggtaacgtctctggatcatatgtcaactaccaggacc aggcacagctgacctgtaacagtggctaccaggccagtgatagtagttttctagtatgcagtggtcagcaaaccttacat gttacagggagtccatctgtcctagccaatcagctgacttgtatagatattgatgaatgttcacggacacatggctgtaa tgtcacaacagaggattgtaagaatactgagggatcgtacacatgtgaatgtaaaacaggattttatcacaacttaacta ctacggcatgtgaagatgtagatgaatgtgagagcaataacggaggttgtgactcggagtgcatcaatacactaggatct tatacgtgtggctgctccgcccttactggtcacaccctgtatattacaaacggtacagaaaacttgtacatacccagtac agagactggagggagggtcggagacaagtaccatatcggtcattcctgtgtcaaggtatcatgttccatcccgcccactt tacagaatggattcatcttgaacagacaactttattatcactacggtgatgagattttgtatagatgtaaccatggatac atgctactaggaaacaggaagctacaatgtcagagcacaggattatgggattatagcttcccatcatgccaggtgataga ctgtggaaccccagagaacttacctggatctgtcactacctacactcctggtcagactaattactatggtaaccagttca ctgtcacatgtcaggatttctaccgtctccatggcaacagtattcaaggagacaatattgtcaggtgtagttctaatggc tactgggattatggcaacataagatgtctacctgtacaatgcccaggtataggttcccctctgggaggtcagcagagagg ttcaggttatgaactcggcagtactagatcctttatatgtgacaggcctggttataccctgtccaatatttatcccgttg aatgtgtagcctcacaagataatgccaccttggtatggaatggaactgtaccctcatgtctggctcacctcgatgaagtc aagggggggcttatgctatcgcctcagcgtcggcactataggttaagcaaaacgggacaggtccattcccaccaatctgt aagtcctatgtcaaccaaacttgcatggatgatgcatctgaggatgcttacaacaatgcatggcgcagaggctgcaactg acctacatttcatgcttgaatga |
|
Protein
| Protein ID | pfu_aug2.0_14.1_13403.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13403.t1 MTTLILFKNGHNNKNPDVPLSCPSGWTISDVHCYKVFTNPVTWLNANSICKRDGGHLVQPRDELANSDIGGLVASQIVGE YWIGLLVQGVKNVSSRSIQQSQLLQNVHGVNMSNMEWWEARWADGTDATLFEAFWDMSQPNTTAGDCVYTTKTQGGMYRW GVDSCQTKKAFVCQRPTCSQGAFHCHDGTCVNQKYVCDGEASCQDGSDEMDCPGQCRYIVRGGNGKIQSPNYPFEYGDNT KCSWVIEGPQGSNIRLQFLEFNTEKHDDLVTLLVGGRTPLTSTFVTRLSGVMTGHSVTYSSYNNFFIVVFSSDIGVNGRG FQANWTAVTTLESSSVQNVIARSSYQELTSPLYNQDYMYGEDVFWVIKSEHARNIITIKPSDIDIHDGDFLIVRDGTNIY GPILGVYTSTGGPDYIISTCGLRVTYSTLSQYRSERKRGFKLLYREGCDITVTEDKGVIFSPGYGIVNYENYQNCSWTID LPVSRRVTVIFDNSFDVEEGYDYLQLYEGLDSSGPPLHPGMGFTGTTAPLPVSSNSGKMFINLKTDSIRSRKGYQGKFSI GCPVPNFNQYTIVTPSIVHYDFGVVFNVSCQTGYEFTSEELLRSDGTSIDYITVECLYGGSWNVRRIPQCSPKYCGQPPS VVNGYISTSTGAVYTSTVKYKCMDGFTTSGSDVISCKADGSWDSPPLCIRISDGIYTIQEGTGSDFASSLLYSCNTGYQI SGAPILFCLPNGTWSAPGPTCIKLQCYVPTLTNGHITMSGRGNVSGSYVNYQDQAQLTCNSGYQASDSSFLVCSGQQTLH VTGSPSVLANQLTCIDIDECSRTHGCNVTTEDCKNTEGSYTCECKTGFYHNLTTTACEDVDECESNNGGCDSECINTLGS YTCGCSALTGHTLYITNGTENLYIPSTETGGRVGDKYHIGHSCVKVSCSIPPTLQNGFILNRQLYYHYGDEILYRCNHGY MLLGNRKLQCQSTGLWDYSFPSCQVIDCGTPENLPGSVTTYTPGQTNYYGNQFTVTCQDFYRLHGNSIQGDNIVRCSSNG YWDYGNIRCLPVQCPGIGSPLGGQQRGSGYELGSTRSFICDRPGYTLSNIYPVECVASQDNATLVWNGTVPSCLAHLDEV KGGLMLSPQRRHYRLSKTGQVHSHQSVSPMSTKLAWMMHLRMLTTMHGAEAATDLHFMLE |
|