Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_14.1_13405
Locus scaffold14.1 : 826171 ... 857809 : -
To GenomeBrowser scaffold14.1:826171..857809
Genes list of scaffold scaffold14.1
Synonym pfu_aug1.0_29046.1_55289

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_14.1_13405.t1 16 1 EGF_CA 28 39 1.1e-10 41.3 2.4 3900.0 -2.1
pfu_aug2.0_14.1_13405.t1 14 1 cEGF 28 39 1.0e-09 37.8 0.96 1600.0 -1.2
pfu_aug2.0_14.1_13405.t1 5 1 GCC2_GCC3 165 172 8.5e-14 50.8 9.0 15000.0 -4.8
pfu_aug2.0_14.1_13405.t1 16 2 EGF_CA 166 200 1.1e-10 41.3 9.0 15000.0 -4.3
pfu_aug2.0_14.1_13405.t1 7 1 EGF 167 185 1.3e-18 66.5 1.8 3000.0 -1.7
pfu_aug2.0_14.1_13405.t1 13 1 FXa_inhibition 177 199 2.8e-12 46.5 9.0 15000.0 -5.5
pfu_aug2.0_14.1_13405.t1 3 1 CUB 195 303 6.8e-40 135.5 1.2e-24 2.0e-21 76.0
pfu_aug2.0_14.1_13405.t1 3 2 CUB 334 438 6.8e-40 135.5 0.00012 0.2 11.7
pfu_aug2.0_14.1_13405.t1 3 3 CUB 459 573 6.8e-40 135.5 5.9e-15 9.8e-12 44.9
pfu_aug2.0_14.1_13405.t1 12 1 Sushi 577 633 1.6e-30 105.2 0.063 100.0 3.3
pfu_aug2.0_14.1_13405.t1 14 2 cEGF 603 609 1.0e-09 37.8 1.2 2000.0 -1.5
pfu_aug2.0_14.1_13405.t1 12 2 Sushi 647 700 1.6e-30 105.2 2.3e-12 3.9e-09 36.7
pfu_aug2.0_14.1_13405.t1 16 3 EGF_CA 673 685 1.1e-10 41.3 7.5 12000.0 -3.7
pfu_aug2.0_14.1_13405.t1 14 3 cEGF 673 680 1.0e-09 37.8 0.22 360.0 0.9
pfu_aug2.0_14.1_13405.t1 13 2 FXa_inhibition 674 688 2.8e-12 46.5 1.4 2400.0 -1.3
pfu_aug2.0_14.1_13405.t1 12 3 Sushi 705 761 1.6e-30 105.2 1.1e-12 1.9e-09 37.7
pfu_aug2.0_14.1_13405.t1 14 4 cEGF 733 740 1.0e-09 37.8 1.2 1900.0 -1.4
pfu_aug2.0_14.1_13405.t1 12 4 Sushi 766 818 1.6e-30 105.2 7.1e-08 0.00012 22.3
pfu_aug2.0_14.1_13405.t1 13 3 FXa_inhibition 791 797 2.8e-12 46.5 5.1 8500.0 -3.0
pfu_aug2.0_14.1_13405.t1 16 4 EGF_CA 791 806 1.1e-10 41.3 3.3 5500.0 -2.6
pfu_aug2.0_14.1_13405.t1 14 5 cEGF 791 823 1.0e-09 37.8 0.025 41.0 3.9
pfu_aug2.0_14.1_13405.t1 16 5 EGF_CA 820 858 1.1e-10 41.3 1.9e-10 3.1e-07 30.2
pfu_aug2.0_14.1_13405.t1 7 2 EGF 824 850 1.3e-18 66.5 7.4e-05 0.12 12.3
pfu_aug2.0_14.1_13405.t1 13 4 FXa_inhibition 829 858 2.8e-12 46.5 1.2e-11 1.9e-08 34.2
pfu_aug2.0_14.1_13405.t1 12 5 Sushi 840 857 1.6e-30 105.2 0.38 630.0 0.8
pfu_aug2.0_14.1_13405.t1 14 6 cEGF 840 863 1.0e-09 37.8 6.3e-13 1.0e-09 37.8
pfu_aug2.0_14.1_13405.t1 16 6 EGF_CA 860 888 1.1e-10 41.3 5.6e-07 0.00093 19.1
pfu_aug2.0_14.1_13405.t1 13 5 FXa_inhibition 864 899 2.8e-12 46.5 8.6e-10 1.4e-06 28.2
pfu_aug2.0_14.1_13405.t1 7 3 EGF 866 887 1.3e-18 66.5 0.012 20.0 5.2
pfu_aug2.0_14.1_13405.t1 14 7 cEGF 882 898 1.0e-09 37.8 0.0012 2.0 8.1
pfu_aug2.0_14.1_13405.t1 12 6 Sushi 930 973 1.6e-30 105.2 2.3e-10 3.8e-07 30.3
pfu_aug2.0_14.1_13405.t1 12 7 Sushi 1055 1108 1.6e-30 105.2 9.5e-07 0.0016 18.7
pfu_aug2.0_14.1_13405.t1 16 7 EGF_CA 1110 1125 1.1e-10 41.3 6.5 11000.0 -3.5
pfu_aug2.0_14.1_13405.t1 14 8 cEGF 1118 1124 1.0e-09 37.8 8.0 13000.0 -4.1
pfu_aug2.0_14.1_13405.t1 12 8 Sushi 1119 1179 1.6e-30 105.2 0.0068 11.0 6.4
pfu_aug2.0_14.1_13405.t1 12 9 Sushi 1251 1270 1.6e-30 105.2 9.0 15000.0 -3.7
pfu_aug2.0_14.1_13405.t1 16 8 EGF_CA 1367 1391 1.1e-10 41.3 2.0 3300.0 -1.9
pfu_aug2.0_14.1_13405.t1 13 6 FXa_inhibition 1368 1385 2.8e-12 46.5 0.51 850.0 0.2
pfu_aug2.0_14.1_13405.t1 12 10 Sushi 1369 1413 1.6e-30 105.2 0.22 370.0 1.5
pfu_aug2.0_14.1_13405.t1 12 11 Sushi 1530 1541 1.6e-30 105.2 3.2 5300.0 -2.2
pfu_aug2.0_14.1_13405.t1 5 2 GCC2_GCC3 1572 1618 8.5e-14 50.8 2.2e-14 3.6e-11 42.4
pfu_aug2.0_14.1_13405.t1 13 7 FXa_inhibition 1576 1588 2.8e-12 46.5 9.0 15000.0 -4.3
pfu_aug2.0_14.1_13405.t1 16 9 EGF_CA 1576 1590 1.1e-10 41.3 1.5 2500.0 -1.5
pfu_aug2.0_14.1_13405.t1 14 9 cEGF 1580 1587 1.0e-09 37.8 9.0 15000.0 -5.2
pfu_aug2.0_14.1_13405.t1 14 10 cEGF 1598 1604 1.0e-09 37.8 5.0 8200.0 -3.5
pfu_aug2.0_14.1_13405.t1 5 3 GCC2_GCC3 1623 1659 8.5e-14 50.8 0.00013 0.21 11.2
pfu_aug2.0_14.1_13405.t1 13 8 FXa_inhibition 1633 1645 2.8e-12 46.5 7.4 12000.0 -3.6
pfu_aug2.0_14.1_13405.t1 16 10 EGF_CA 1641 1666 1.1e-10 41.3 9.0 15000.0 -5.0
pfu_aug2.0_14.1_13405.t1 13 9 FXa_inhibition 1659 1687 2.8e-12 46.5 1.7 2800.0 -1.5
pfu_aug2.0_14.1_13405.t1 5 4 GCC2_GCC3 1666 1707 8.5e-14 50.8 9.5e-09 1.6e-05 24.4
pfu_aug2.0_14.1_13405.t1 16 11 EGF_CA 1675 1687 1.1e-10 41.3 9.0 15000.0 -5.3
pfu_aug2.0_14.1_13405.t1 16 12 EGF_CA 1688 1701 1.1e-10 41.3 5.9 9600.0 -3.4
pfu_aug2.0_14.1_13405.t1 16 13 EGF_CA 1717 1748 1.1e-10 41.3 5.4 8900.0 -3.3
pfu_aug2.0_14.1_13405.t1 13 10 FXa_inhibition 1719 1746 2.8e-12 46.5 0.12 200.0 2.1
pfu_aug2.0_14.1_13405.t1 7 4 EGF 1721 1746 1.3e-18 66.5 2.7e-05 0.045 13.7
pfu_aug2.0_14.1_13405.t1 12 12 Sushi 1729 1745 1.6e-30 105.2 9.0 15000.0 -3.7
pfu_aug2.0_14.1_13405.t1 14 11 cEGF 1736 1746 1.0e-09 37.8 0.35 580.0 0.2
pfu_aug2.0_14.1_13405.t1 5 5 GCC2_GCC3 1738 1756 8.5e-14 50.8 9.0 15000.0 -5.2
pfu_aug2.0_14.1_13405.t1 16 14 EGF_CA 1752 1782 1.1e-10 41.3 0.0005 0.82 9.7
pfu_aug2.0_14.1_13405.t1 7 5 EGF 1755 1784 1.3e-18 66.5 2.8e-09 4.6e-06 26.4
pfu_aug2.0_14.1_13405.t1 13 11 FXa_inhibition 1764 1784 2.8e-12 46.5 0.00087 1.4 9.0
pfu_aug2.0_14.1_13405.t1 14 12 cEGF 1772 1786 1.0e-09 37.8 0.00063 1.0 9.0
pfu_aug2.0_14.1_13405.t1 16 15 EGF_CA 1791 1825 1.1e-10 41.3 1.7e-08 2.8e-05 23.9
pfu_aug2.0_14.1_13405.t1 7 6 EGF 1794 1824 1.3e-18 66.5 4.4e-08 7.2e-05 22.6
pfu_aug2.0_14.1_13405.t1 13 12 FXa_inhibition 1798 1821 2.8e-12 46.5 0.0046 7.6 6.7
pfu_aug2.0_14.1_13405.t1 14 13 cEGF 1811 1821 1.0e-09 37.8 0.25 420.0 0.7
pfu_aug2.0_14.1_13405.t1 7 7 EGF 1832 1861 1.3e-18 66.5 6.5e-08 0.00011 22.1
pfu_aug2.0_14.1_13405.t1 13 13 FXa_inhibition 1836 1860 2.8e-12 46.5 0.074 120.0 2.9
pfu_aug2.0_14.1_13405.t1 16 16 EGF_CA 1836 1860 1.1e-10 41.3 9.0 15000.0 -5.5
pfu_aug2.0_14.1_13405.t1 14 14 cEGF 1852 1865 1.0e-09 37.8 0.0074 12.0 5.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_14.1_13405.t1 gi|195116387|ref|XP_002002737.1| GI11276 [Drosophila mojavensis] 0.0

Transcript
Transcript IDpfu_aug2.0_14.1_13405.t1
Definition-
>pfu_aug2.0_14.1_13405.t1
atgatttcaagacttgctggttttgtgtgctttctatcggtgctatccaaattatatgctcagcaaacaataaattatgc
atgtccctcaggatgggagaacataggaacatcatgttatcgagtgttcggtaccagttcctcacaggccctgacttggc
agaatgcctacagaacatgccaaggatatgggtccatgctggttgaggtacatgattatctctctaatgaagagattggc
atgttcggttaccaaagatcggcatcaaagttctggataggtatgagtagaattaatgctaataacgatgctttctctac
aacatggaatatgcgcactccggccacgatatacgagggatactatcataacaacatgcccgacctaactaaaggagact
gcatgtacgtggagaggtccaacgattaccctacgtacaagtgggtggtgggtaaatgtaaagaaaagatggcctttatc
tgtcagcggccttcatgtcctactgggagtttcttctgtaacaatggtagatgtataaacagccagtggttctgtgacgg
tgaagataattgtgccagtagatgtagacaggaattcacaatgtcatcagggaccattctgtcccccaactatccacagc
cttatgattctgccaaggtctgcacatggactatcattaccccagaaggaaccaatgtttttctacagtttaacagtttt
aacacggaggaaaataatgacatcgtagacattttgattggaggaagaacagagacaacttcacgatccatcgctaggat
ttctggatcctccccatccatgtcccgtttccgtagctacaataattacatgattgtacgtttacagtcagaccaacaaa
cccagtactcaggatttaacgccacatttaccagcttaaatgacaactatccagaggctacctacctgacagccattagc
actcctcagaatctagagccccctctgttccagtctaccggtgccaattcatatctgggaaacaaggactatgtttgggt
tttgacagctcaggaacggagaaaaattatcactatagagaggctaatgatagatttggcaatgggagatgagattgaca
ttcacgatggggattccccttctgcccctatcatagcacgttacagggcccataacaacgataacgtgatgtggacgatg
catacgacccagtctcctcacggccctcgatttgtgttctccactgattataagatgtatatcataatgagaacagctag
ctctaccagcggcagaggattcagatttaattactggcaagtcattgtctgctttattggcagaggctttagttttaact
acagtttcataggatgtgacgttacttacacccaagaatacggtgaaatattcagccctggatatggcgttgttaattat
gccaataaccaggagtgtacctggactataaatatagccagtggtaaagccttctcactacagtttgatgcaggctttca
gctacaggataattatgacttccttcaggtatttaaagcggccacaaattcctctggtgtaccagcacatcctgtcacta
atggttttactactgtatctttggcatcatccaatccaatcaagagtgataatggcaaaatgttcctacgttttaaaact
ggtgctgtaacaaatgccaagggttttcgagcactttactctgtggattgtccaaacccatcgttctcggcatataccag
taaaagcagtgctacgtctaattcctacttggtgaactttgaagtttcttgtctgagcggctactccttccgcacggatg
aattcatgtctgctcgggttagaatggaatgtatgcttggtggaaattggctgtcagcaaataaaacaaggactatccca
tcatgcctaccaaactactgtggactcccttccactgtagctaatgcctatatttctgcttcatctggggtagagtataa
taattatgctacctacacgtgttaccaaggttacagacttattggtaatgccaatatcacatgtttggccagtggacagt
ggtcaataggccccacatgtcaggccgctagttgccctcaagctggtgatatagtaaatggtcaacgtacggttaagtct
ggagatctgacatcctacgcctcaatagtacagtataattgtaacgagggatttgaacttgttggagttcctatattgtt
ctgtcagtctaacggaacctggacctccttgctaccaacctgtagacctctgaaatgtcccctcccgatggttatgcatg
gaacattaagccagagcaccatgcctgatgtaggtcagtccgtaactgtatcatgtgatactggctaccagatcgttgga
aatgccgttatgaactgccttgccaacgaaacgtttgatgctgttcctatgtgtaacgatattgatgaatgtcagccgtt
agccggatgtgcccagagatgtcacaatacagaaggctcctacacatgctcctgtaatgacggttatacacttaactctg
atggaaggaattgtgacgatattaatgagtgtaatgttgacaatggcggctgcgaccaggtgtgtaccaataatgtcggt
gcttatacatgttcctgtaacgaggcaggatatatactgttctctcaggacggaacttcaggatataatatacaaactaa
tgtggaaacagggcttagagtcaatgatactctacatctgaatcacacgtgtgtccgtgtcagctgtcccaccccgataa
ccagaaccacacatcggtaccaggacaccatctcatacttttgtaaccttggatatgtgagaacatccggatcggaagat
tttacgtgtggctctgatggccagtggtctccatctcagacctctaacatccttgtttgtagtggtgccacatgtccagc
agagaattggcagtcccagagtcttgtcaatagtccgcagtctgttgtccctaatacggcagtgaactaccttgactatg
tcaatatcacatgtaacgtacaaggacggggaacattcgtcaagcaacgtcattgtctgtatgacaaaccaactaactcc
tacaaactttatggggacgagtacgaatgtggagtgattgattgtggtagtccaggccaagagccaaatacaaactatcc
tttgccagcccaaactacatatggaaatacatttaactatacttgtgctgcacttatggctctcagtggaaactctagcc
ttggtaacagcttagtcacctgtatggccaatggtaactgggatttcggatccttacagtgtctaggttctagctgtcca
gatcccggctacccaaatggtggttatcaagtagccacctcgtatgctaaaaattctatcgtaacgtttggatgtaaccg
tacaggctacgagttgactttcaccgagggacttgagtgcatcgttaatcaggctggtaatgggctggagtggaataaca
caaacagaccacagtgtgtcgatactcagaatccttctgtatcaaactgtgagagtgatagatcggtaattccattttct
cgtgttgccctgagtacaccattcgtcggtgataacactggtattaagaccgagtcatactcacctgtaagtgccaacac
aacactaacggtagaaaagacgtcagttactgtaacatataccgtgcaggatttcgaaaacttggcagattcatgtacca
ccacatttagtgttacagataatgttcctcccactgtcacatgtccggattcacgcgtagagtatgtaagtggtagtgga
acaagggacataaccacagtcactcctgctaatgtggtagcctcagacaccaccccagggggagctggtacacgcccaac
tgtcgtagtcaatcccccaaatatagtggtgtcaactggtaatattgaccaatttttcaatgtacaagtacaggctacag
attcagcgggattacaagatacatgctcattccagattctgattagagctgatccatgttccgagatttcattgccgaca
cctgccaatggtttaaagaactgtagcgcaactaacaatggacatgtttgtgatcttggttgcctcaatggttttgtgtc
ctacaacaacccaaatcaggatgtcgtcaccgtcacttgtactactggaaacccgtggccaacagtcataccagcctgta
ctcctttatctgttcaggctgaataccagcaagtctacacagtatcttactcaagtcctaccaaccagattttgaatcaa
gcatgcctggccacttacgaggctcaaatgagaatagatatacctactgatgaagttactgccgtaaacacttgtcgtcc
gtccactggtgccacgcttgtcgacattctgcaaaatgaagtacaagcaacgtttatatctaattcgcaaattgatattc
ggttcacggtaaaattccaaccttctagtagcgcagagggttgtggaaatttgatggaaactctggtatcagcaagaacc
ttatctttgatgagtctgacaaccaataactgtacggaaattacagggtcatggtcaaatacccagaatcagttacagga
gggatctatttgttcctcaaacaggaaggaggccaccattgataacgtcaaatggtgtttggactgtcccctgggaatgt
acagtacaggatcagcccagtgtagtctctgtcctaaaggcacatataaaagtgtcgttggccagcaggaatgtacgcca
tgtaacccagggctgtctactcacgatgaaggctccatctcgtcaaatgcatgtagaagattgccaccttgttttcagtg
tgctaaaaatagttacggctttaacagtaccacatgtcagtcatgtgacccagacaagattaccctcaatacaggatctt
tttcatctacatcatgccttgcccaatgtcagcctggtacgttttcacacaatggacatgttccttgtacaagctgtcct
gctaactacatgcagagtcaggctggacagatagattgtcaaaagtgtgcctcaaatagcagatctaccgctggaagttc
tagttgtacagtcataaatgttactgctgagtgtgaaggaagatgtcagaatggagcccagtgtgtagtccaggaccatc
aagtccaatgtttgtgctcggcaggctactatggtagtcagtgtaatatccaggttgataactgtctgtcgagaccatgt
tataatgggggcgtctgtgttaatggcgttaattcctatacctgtaactgtccaacaggattaacgggctcacaatgtga
agtagacatggtaaatgaatgtgacagtgcgccatgtaaaaatggagggatgtgtgttaaccagataggatcgttcaaat
gtctgtgtatagctggattctctggcattacgtgtgagagccagcagaatatttgtgtacaacagccgtgtagtaacgga
gcaagatgtatcagtctggataatgtccgaagacgatgtgaatgcttggacggttacgaaggtgtcagctgtcaaaccaa
catcaaaagcatatga

Protein
Protein IDpfu_aug2.0_14.1_13405.t1
Definition-
>pfu_aug2.0_14.1_13405.t1
MISRLAGFVCFLSVLSKLYAQQTINYACPSGWENIGTSCYRVFGTSSSQALTWQNAYRTCQGYGSMLVEVHDYLSNEEIG
MFGYQRSASKFWIGMSRINANNDAFSTTWNMRTPATIYEGYYHNNMPDLTKGDCMYVERSNDYPTYKWVVGKCKEKMAFI
CQRPSCPTGSFFCNNGRCINSQWFCDGEDNCASRCRQEFTMSSGTILSPNYPQPYDSAKVCTWTIITPEGTNVFLQFNSF
NTEENNDIVDILIGGRTETTSRSIARISGSSPSMSRFRSYNNYMIVRLQSDQQTQYSGFNATFTSLNDNYPEATYLTAIS
TPQNLEPPLFQSTGANSYLGNKDYVWVLTAQERRKIITIERLMIDLAMGDEIDIHDGDSPSAPIIARYRAHNNDNVMWTM
HTTQSPHGPRFVFSTDYKMYIIMRTASSTSGRGFRFNYWQVIVCFIGRGFSFNYSFIGCDVTYTQEYGEIFSPGYGVVNY
ANNQECTWTINIASGKAFSLQFDAGFQLQDNYDFLQVFKAATNSSGVPAHPVTNGFTTVSLASSNPIKSDNGKMFLRFKT
GAVTNAKGFRALYSVDCPNPSFSAYTSKSSATSNSYLVNFEVSCLSGYSFRTDEFMSARVRMECMLGGNWLSANKTRTIP
SCLPNYCGLPSTVANAYISASSGVEYNNYATYTCYQGYRLIGNANITCLASGQWSIGPTCQAASCPQAGDIVNGQRTVKS
GDLTSYASIVQYNCNEGFELVGVPILFCQSNGTWTSLLPTCRPLKCPLPMVMHGTLSQSTMPDVGQSVTVSCDTGYQIVG
NAVMNCLANETFDAVPMCNDIDECQPLAGCAQRCHNTEGSYTCSCNDGYTLNSDGRNCDDINECNVDNGGCDQVCTNNVG
AYTCSCNEAGYILFSQDGTSGYNIQTNVETGLRVNDTLHLNHTCVRVSCPTPITRTTHRYQDTISYFCNLGYVRTSGSED
FTCGSDGQWSPSQTSNILVCSGATCPAENWQSQSLVNSPQSVVPNTAVNYLDYVNITCNVQGRGTFVKQRHCLYDKPTNS
YKLYGDEYECGVIDCGSPGQEPNTNYPLPAQTTYGNTFNYTCAALMALSGNSSLGNSLVTCMANGNWDFGSLQCLGSSCP
DPGYPNGGYQVATSYAKNSIVTFGCNRTGYELTFTEGLECIVNQAGNGLEWNNTNRPQCVDTQNPSVSNCESDRSVIPFS
RVALSTPFVGDNTGIKTESYSPVSANTTLTVEKTSVTVTYTVQDFENLADSCTTTFSVTDNVPPTVTCPDSRVEYVSGSG
TRDITTVTPANVVASDTTPGGAGTRPTVVVNPPNIVVSTGNIDQFFNVQVQATDSAGLQDTCSFQILIRADPCSEISLPT
PANGLKNCSATNNGHVCDLGCLNGFVSYNNPNQDVVTVTCTTGNPWPTVIPACTPLSVQAEYQQVYTVSYSSPTNQILNQ
ACLATYEAQMRIDIPTDEVTAVNTCRPSTGATLVDILQNEVQATFISNSQIDIRFTVKFQPSSSAEGCGNLMETLVSART
LSLMSLTTNNCTEITGSWSNTQNQLQEGSICSSNRKEATIDNVKWCLDCPLGMYSTGSAQCSLCPKGTYKSVVGQQECTP
CNPGLSTHDEGSISSNACRRLPPCFQCAKNSYGFNSTTCQSCDPDKITLNTGSFSSTSCLAQCQPGTFSHNGHVPCTSCP
ANYMQSQAGQIDCQKCASNSRSTAGSSSCTVINVTAECEGRCQNGAQCVVQDHQVQCLCSAGYYGSQCNIQVDNCLSRPC
YNGGVCVNGVNSYTCNCPTGLTGSQCEVDMVNECDSAPCKNGGMCVNQIGSFKCLCIAGFSGITCESQQNICVQQPCSNG
ARCISLDNVRRRCECLDGYEGVSCQTNIKSI

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495