Gene
| Gene Model ID | pfu_aug2.0_14.1_13406 |
|---|---|
| Locus | scaffold14.1 : 861796 ... 876829 : - |
| To GenomeBrowser | scaffold14.1:861796..876829 |
| Genes list of scaffold | scaffold14.1 |
| Synonym | pfu_aug1.0_3500.1_30427 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14.1_13406.t1 | 1 | 1 | SAM_1 | 5 | 69 | 1.4e-17 | 63.6 | 7.9e-21 | 2.3e-17 | 62.8 |
| pfu_aug2.0_14.1_13406.t1 | 1 | 1 | SAM_2 | 5 | 67 | 1.7e-07 | 30.9 | 1.3e-10 | 3.8e-07 | 29.8 |
| pfu_aug2.0_14.1_13406.t1 | 4 | 1 | PAP2_C | 150 | 153 | 2.0e-24 | 85.6 | 2.7 | 8100.0 | -2.9 |
| pfu_aug2.0_14.1_13406.t1 | 4 | 2 | PAP2_C | 198 | 209 | 2.0e-24 | 85.6 | 0.78 | 2300.0 | -1.1 |
| pfu_aug2.0_14.1_13406.t1 | 4 | 3 | PAP2_C | 256 | 256 | 2.0e-24 | 85.6 | 3.4 | 10000.0 | -3.2 |
| pfu_aug2.0_14.1_13406.t1 | 4 | 4 | PAP2_C | 315 | 388 | 2.0e-24 | 85.6 | 6.7e-28 | 2.0e-24 | 85.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14.1_13406.t1 | gi|676450974|ref|XP_009052553.1| | hypothetical protein LOTGIDRAFT_239747 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_14.1_13406.t1 | gi|260816340|ref|XP_002602929.1| | hypothetical protein BRAFLDRAFT_288304 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_14.1_13406.t1 | gi|168823483|ref|NP_001108374.1| | uncharacterized protein LOC100141337 [Danio rerio] | 0.0 |
| pfu_aug2.0_14.1_13406.t1 | gi|432923379|ref|XP_004080446.1| | PREDICTED: sphingomyelin synthase-related protein 1 [Oryzias latipes] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_14.1_13406.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13406.t1 atggacactcagtcatggacatgtagtgatgtaggagcatggttagaagacaatagattacaacaatacaaaaaatgttt ttgtcaacagcataagatagatggaaaggttttactaagtctcacggaggacgatcttagacagccgcccctcgaaatca aagttctaggtgatattaaacgtttgatgaagcttataagaggacttcagagtagcgatgtgagaagcagttctatacag tcagtgcagagaaaccgtttaagcagcaatatttccaccaaaggtatagacctgcttgaaaaattggacaagaaagattc agacattggtgaaggagaaatacaagctgcagaggaaatattagagtgtgccaagaagaggaagtctcagaacctggatc cggaaatatacaaaactgttctaagctttatttatgcctacgcagttttcctttttacatcatttatcatggtagtcgta catgaccgtgtgccagatatggagaaacatccccctctaccagacattttcttagataatgtgccgtttataccttgggc atttaaagctgcagagattatcggtgttttcctcctagctgtttgggttgtagtactcgtcttccacaaacatagaagtt caaaaattaagatttatattgatgaggaggatgttttctctactggggaccctgtttttgttacgatgtgtctgtatgct gattacttcactctctgtgcctgatttatattgatgaggaggatgttttctctactagggaccctgtttttgttacgatg tgtctgtatgctgataacttcactctctgtgcctggtaaacatctcaaatgtgaaggaaagttatatcctgacattcatt ccaagctacagcgtactattgaggtgtggacggggatggggatgtctatatccggagtgaggacgtgtggggattacatg ttcagtggacacacgtgctgcattacatgcttcaactttttcatcacagaatatacaccaagacatataccatttctcca tacaacaacatggatagctaacttctttgggctgttcttcatactcgctgctcatgaacattattcgttagacgtgtttg tggctttctacttgacatcgagattatttctgtattatcatacactagccagctccaggtccctgcttggcaaggagaag aagaggacgaggatttggtttcccttatttatgttctttgagtccaaatgtgacgatgatcaaatgttagaataa |
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Protein
| Protein ID | pfu_aug2.0_14.1_13406.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14.1_13406.t1 MDTQSWTCSDVGAWLEDNRLQQYKKCFCQQHKIDGKVLLSLTEDDLRQPPLEIKVLGDIKRLMKLIRGLQSSDVRSSSIQ SVQRNRLSSNISTKGIDLLEKLDKKDSDIGEGEIQAAEEILECAKKRKSQNLDPEIYKTVLSFIYAYAVFLFTSFIMVVV HDRVPDMEKHPPLPDIFLDNVPFIPWAFKAAEIIGVFLLAVWVVVLVFHKHRSSKIKIYIDEEDVFSTGDPVFVTMCLYA DYFTLCAXFILMRRMFSLLGTLFLLRCVCMLITSLSVPGKHLKCEGKLYPDIHSKLQRTIEVWTGMGMSISGVRTCGDYM FSGHTCCITCFNFFITEYTPRHIPFLHTTTWIANFFGLFFILAAHEHYSLDVFVAFYLTSRLFLYYHTLASSRSLLGKEK KRTRIWFPLFMFFESKCDDDQMLE |
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