Gene
| Gene Model ID | pfu_aug2.0_1404.1_15015 |
|---|---|
| Locus | scaffold1404.1 : 4986 ... 23140 : + |
| To GenomeBrowser | scaffold1404.1:4986..23140 |
| Genes list of scaffold | scaffold1404.1 |
| Synonym | pfu_aug1.0_19021.1_11184 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1404.1_15015.t1 | 1 | 1 | TUDOR | 126 | 196 | 3.9e-18 | 65.4 | 2.0e-21 | 5.8e-18 | 64.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1404.1_15015.t1 | gi|676472485|ref|XP_009059505.1| | hypothetical protein LOTGIDRAFT_124728 [Lottia gigantea] | 3.0e-34 |
| pfu_aug2.0_1404.1_15015.t1 | gi|260835689|ref|XP_002612840.1| | hypothetical protein BRAFLDRAFT_67212 [Branchiostoma floridae] | 3.0e-33 |
| pfu_aug2.0_1404.1_15015.t1 | gi|72006494|ref|XP_785759.1| | PREDICTED: tudor and KH domain-containing protein [Strongylocentrotus purpuratus] | 2.0e-31 |
| pfu_aug2.0_1404.1_15015.t1 | gi|241067986|ref|XP_002408421.1| | tudor domain-containing protein, putative [Ixodes scapularis] | 4.0e-31 |
| pfu_aug2.0_1404.1_15015.t1 | gi|564235522|ref|XP_006274678.1| | PREDICTED: tudor and KH domain-containing protein [Alligator mississippiensis] | 5.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_1404.1_15015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1404.1_15015.t1 atgttgagtattcctcccaaagttgttgctttaatagttggaattccaaccacagctctcttactatactggctttttgg agaaaaggaagacgatgaagaccaagaaaagaacaaaaacatagcaacatcacgtcaaacagtgatagaggtgaaggtcc caggtaaagcagctggagcaattataggtagacaaggggcaaacatcaaagagacactgattgctgagaaggtacaggag gaggaggtgttccgtgccaagcaggctgtaatggaagccaacagagagaagaggagtcacacacagaataaacaggagtc aaagactgtcaaaacaccaggtacacctgttactaaacttgcacagaacctcccagatacagtgtcggtgggtgatattg tagcggctccatttgacatggactcgtcatggtacagggcaaaggttatgggcatacaggacagcaatgctgatgttcta tacctggactatggtgatagtacatacctagacaaatctcggctctgtacactcagccccaactttttaaaacttccatt ccaagctatagagtgtgaattatcagggatcatacctactggatcaggtgcaaataatgaatggtcagaggctgcagtgg ataggtttgaagaattaacatatagtgccaagtggaaggtcttaatggcaaaaagggtaggagcaaagaaacttgccagt ggtgatgtggtacagatagtggaacttattgacactaattctgagaaggatgtgaatataggaaaacagttagtacatga aagatatgccgactggaattcccaggattcatag |
|
Protein
| Protein ID | pfu_aug2.0_1404.1_15015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1404.1_15015.t1 MLSIPPKVVALIVGIPTTALLLYWLFGEKEDDEDQEKNKNIATSRQTVIEVKVPGKAAGAIIGRQGANIKETLIAEKVQE EEVFRAKQAVMEANREKRSHTQNKQESKTVKTPGTPVTKLAQNLPDTVSVGDIVAAPFDMDSSWYRAKVMGIQDSNADVL YLDYGDSTYLDKSRLCTLSPNFLKLPFQAIECELSGIIPTGSGANNEWSEAAVDRFEELTYSAKWKVLMAKRVGAKKLAS GDVVQIVELIDTNSEKDVNIGKQLVHERYADWNSQDS |
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