Gene
| Gene Model ID | pfu_aug2.0_1404.1_15021 |
|---|---|
| Locus | scaffold1404.1 : 98976 ... 101849 : + |
| To GenomeBrowser | scaffold1404.1:98976..101849 |
| Genes list of scaffold | scaffold1404.1 |
| Synonym | pfu_aug1.0_58390.1_27440 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1404.1_15021.t1 | 1 | 1 | TRAM_LAG1_CLN8 | 4 | 75 | 6.8e-13 | 48.6 | 1.5e-16 | 7.6e-13 | 48.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1404.1_15021.t1 | gi|410905923|ref|XP_003966441.1| | PREDICTED: transmembrane protein 56-B-like [Takifugu rubripes] | 4.0e-14 |
| pfu_aug2.0_1404.1_15021.t1 | gi|734605450|ref|XP_010729828.1| | PREDICTED: transmembrane protein 56-B-like [Larimichthys crocea] | 7.0e-14 |
| pfu_aug2.0_1404.1_15021.t1 | gi|657803653|ref|XP_008328924.1| | PREDICTED: transmembrane protein 56-B-like, partial [Cynoglossus semilaevis] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1404.1_15021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1404.1_15021.t1 atgaaaatgaagagaacatcttgtcttcctttcttcaacggcattatgatgactctgactttcttcatatccaggatttt ggccatgtttgtatattggcacaaggtctacaccgtgtatggcactccggacttcgaggccgtcggccatgtcaaatatg tactgtatatcacttgttccatcctagacttactgaatttgtattggttttacaaaatgtgtaaaggtttggtcaagact ctgacacagagctctaatggtcagctggagcaagttagtgttggtctaaatccagaggatagtaggctgaagttagaatg a |
|
Protein
| Protein ID | pfu_aug2.0_1404.1_15021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1404.1_15021.t1 MKMKRTSCLPFFNGIMMTLTFFISRILAMFVYWHKVYTVYGTPDFEAVGHVKYVLYITCSILDLLNLYWFYKMCKGLVKT LTQSSNGQLEQVSVGLNPEDSRLKLE |
|