Gene
| Gene Model ID | pfu_aug2.0_1404.1_15022 |
|---|---|
| Locus | scaffold1404.1 : 105956 ... 110518 : + |
| To GenomeBrowser | scaffold1404.1:105956..110518 |
| Genes list of scaffold | scaffold1404.1 |
| Synonym | pfu_aug1.0_362.1_15042 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1404.1_15022.t1 | 2 | 1 | TRAM_LAG1_CLN8 | 23 | 42 | 2.8e-33 | 115.1 | 0.29 | 4300.0 | -3.0 |
| pfu_aug2.0_1404.1_15022.t1 | 2 | 2 | TRAM_LAG1_CLN8 | 54 | 242 | 2.8e-33 | 115.1 | 1.9e-37 | 2.8e-33 | 115.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1404.1_15022.t1 | gi|657554983|ref|XP_008281978.1| | PREDICTED: transmembrane protein 56-B-like [Stegastes partitus] | 0.0 |
| pfu_aug2.0_1404.1_15022.t1 | gi|126311380|ref|XP_001381825.1| | PREDICTED: transmembrane protein 56 isoform X1 [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1404.1_15022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1404.1_15022.t1 atgggcagactacaaggtctggagttcgattcctcttactaccccatcatggttgctagcggtgttactgcttttctctt ctccagagtcatctttcctaaggtgtccaagcaatacgtatcagcgtacagagatttgtcagaggccaacaagatttcat ggaataacctgcttatttccagcttacactcaatgatagcatgttttgtgtgcattttggcattcatgtatgaagagaac atgagctcagaacctatctggcaggactgtcctatagtgagaacgagttgtgcaatggtggcaggctatctgattcaaga tatggtcattatgtttctttactgggaagagataggcggaatgcagttcatagtccatcatattctttccgtttacgcct atttttacgttgcgacctacggtgttgccgcttggtttgccaactatagactgttggcagaattttcaaccctttttgtg aataacagatggtttttcgacaccctgaaaatgaaacgaacgcaaggtctaccattcataaacggtgtgctgatgacact aacatttttcttcgcgcgaatcgtcaccatgccgccatattggtataaagtgtacacagtgtatggaacggaggaattcg acgcagtgggtcacataaagtatgtcctgtacgtgacttgtatttccttggacattatgaattcttattggttctacaga atgtgtcttggtgtaaagaaagtcttgacacaacccagtgcaggtattccaagttccgaaaattcaagattgaaagacga ctaa |
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Protein
| Protein ID | pfu_aug2.0_1404.1_15022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1404.1_15022.t1 MGRLQGLEFDSSYYPIMVASGVTAFLFSRVIFPKVSKQYVSAYRDLSEANKISWNNLLISSLHSMIACFVCILAFMYEEN MSSEPIWQDCPIVRTSCAMVAGYLIQDMVIMFLYWEEIGGMQFIVHHILSVYAYFYVATYGVAAWFANYRLLAEFSTLFV NNRWFFDTLKMKRTQGLPFINGVLMTLTFFFARIVTMPPYWYKVYTVYGTEEFDAVGHIKYVLYVTCISLDIMNSYWFYR MCLGVKKVLTQPSAGIPSSENSRLKDD |
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