Gene
| Gene Model ID | pfu_aug2.0_1410.1_01605 |
|---|---|
| Locus | scaffold1410.1 : 3757 ... 4495 : - |
| To GenomeBrowser | scaffold1410.1:3757..4495 |
| Genes list of scaffold | scaffold1410.1 |
| Synonym | pfu_aug1.0_5630.1_09176 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1410.1_01605.t1 | 1 | 1 | TatD_DNase | 2 | 109 | 4.8e-17 | 62.0 | 3.5e-21 | 5.3e-17 | 61.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1410.1_01605.t1 | gi|390344833|ref|XP_003726218.1| | PREDICTED: putative deoxyribonuclease TATDN1 [Strongylocentrotus purpuratus] | 2.0e-13 |
| pfu_aug2.0_1410.1_01605.t1 | gi|340370194|ref|XP_003383631.1| | PREDICTED: uncharacterized protein LOC100631814 [Amphimedon queenslandica] | 2.0e-13 |
| pfu_aug2.0_1410.1_01605.t1 | gi|573885828|ref|XP_006630779.1| | PREDICTED: putative deoxyribonuclease TATDN2-like [Lepisosteus oculatus] | 5.0e-13 |
| pfu_aug2.0_1410.1_01605.t1 | gi|156405601|ref|XP_001640820.1| | predicted protein [Nematostella vectensis] | 1.0e-12 |
| pfu_aug2.0_1410.1_01605.t1 | gi|221129500|ref|XP_002159126.1| | PREDICTED: putative deoxyribonuclease TATDN2 [Hydra vulgaris] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1410.1_01605.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1410.1_01605.t1 atgttgtcccacccgaaggtagtggccctaggagagtgtggattagacagaacaattcctccatctagatggttacggca ggatgagatgttcaagtgcatgctgaatttagcccggccaaatcagcccctcattctgcatctccgtggtccaaaagaag acatatacggactagacattaacgcacgctgtagagaccttatggagaccaggtgtgataggaacaagaaagtccatgtt cactgctttaagggcactgaggagatggttgagtcatggcttaggaagttcccaaatacttattttggtattacagcagc tgtccagtcatttgatgatctttag |
|
Protein
| Protein ID | pfu_aug2.0_1410.1_01605.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1410.1_01605.t1 MLSHPKVVALGECGLDRTIPPSRWLRQDEMFKCMLNLARPNQPLILHLRGPKEDIYGLDINARCRDLMETRCDRNKKVHV HCFKGTEEMVESWLRKFPNTYFGITAAVQSFDDL |
|