Gene
| Gene Model ID | pfu_aug2.0_1410.1_01609 |
|---|---|
| Locus | scaffold1410.1 : 29546 ... 39390 : + |
| To GenomeBrowser | scaffold1410.1:29546..39390 |
| Genes list of scaffold | scaffold1410.1 |
| Synonym | pfu_aug1.0_2594.1_51738 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activating transcription factor 7-interacting protein 1 isoform x3 | GO:0010468 GO:0044260 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1410.1_01609.t1 | 1 | 1 | DUF3504 | 115 | 263 | 2.4e-19 | 69.7 | 7.2e-23 | 3.6e-19 | 69.1 |
| pfu_aug2.0_1410.1_01609.t1 | 1 | 1 | Phage_integrase | 205 | 306 | 5.5e-10 | 39.1 | 2.4e-13 | 1.2e-09 | 38.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1410.1_01609.t1 | gi|700331536|ref|XP_009912665.1| | PREDICTED: uncharacterized protein LOC104314733 isoform X1 [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_1410.1_01609.t1 | gi|704541141|ref|XP_010193380.1| | PREDICTED: uncharacterized protein LOC104548916, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_1410.1_01609.t1 | gi|723579119|ref|XP_010309783.1| | PREDICTED: activating transcription factor 7-interacting protein 1-like [Balearica regulorum gibbericeps] | 0.0 |
| pfu_aug2.0_1410.1_01609.t1 | gi|690422553|ref|XP_009320442.1| | PREDICTED: activating transcription factor 7-interacting protein 1 isoform X5 [Pygoscelis adeliae] | 0.0 |
| pfu_aug2.0_1410.1_01609.t1 | gi|514714195|ref|XP_005012251.1| | PREDICTED: activating transcription factor 7-interacting protein 1 isoform X3 [Anas platyrhynchos] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1410.1_01609.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1410.1_01609.t1 atggaaacgctgggaaaagatatccttgtcttacccctatgggaatggctttgtgataggaatttggatccaaattttga agatttgcccattgaccagttagacaacacactgcgtaggttttatgccgaagtaaggaattctgatggggaatactaca gcaagagcacatttgttggcgtgcgagcctctatcaataggcatatcaggggtcatccttacagcaaaccattttcctta ttggaatcaaaggaattccccaagtccaacacaatgtttctagctatgttgaaaaaaatcaaaaaagagggttgcgataa aacgaaacatcacttaccaatttctgaagctgatcttgaaattttgcgcaactgtggagtgtttagtaccgattgtccca aatcactccaaagaaaggtgtggtttgatataactctgaattttgcacgtaggggccgtgaaaatttgaggcagctcaaa tttgactgtttcaattttgcacaagatgaaaatgggtgcgagtatgtagagatggcatacaatgagtccaccaaaaacca ccaaggtgataatttgaaggatcgagactttgaatgtcgtccaagaatgtatgcttctggaggtgcctcatgcccaatat catctttaagaaagtatctagagctgcgtaatcctaaaactgatcacctgttccagagacccaaggatagcgtacaaaat ggtgtttggtacaattctgcccctataggtgagcgtacattgaatgacatgatgaaggtaatctcgaaggatgcaggtct tagtcgtgtgtacacgaatcactgtgtcagggcaactaccatcactctactgtcccatgctggtgtggaaaccagagaaa tcatgaaaatatcagggcacaggaatgaatcaagcatcaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnngtgcatattctggtattatccagggtcagaaaccagctcttcctccttcagcagccgcagg atctgaacagcagatgctacagttgcaaaatagcaatcaagttcccgctgtaa |
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Protein
| Protein ID | pfu_aug2.0_1410.1_01609.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1410.1_01609.t1 METLGKDILVLPLWEWLCDRNLDPNFEDLPIDQLDNTLRRFYAEVRNSDGEYYSKSTFVGVRASINRHIRGHPYSKPFSL LESKEFPKSNTMFLAMLKKIKKEGCDKTKHHLPISEADLEILRNCGVFSTDCPKSLQRKVWFDITLNFARRGRENLRQLK FDCFNFAQDENGCEYVEMAYNESTKNHQGDNLKDRDFECRPRMYASGGASCPISSLRKYLELRNPKTDHLFQRPKDSVQN GVWYNSAPIGERTLNDMMKVISKDAGLSRVYTNHCVRATTITLLSHAGVETREIMKISGHRNESSIRXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHILVLSRVRNQLFLLQQPQDLNSRCYSCKIAIKFPL |
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