Gene
| Gene Model ID | pfu_aug2.0_1410.1_01612 |
|---|---|
| Locus | scaffold1410.1 : 145516 ... 152220 : + |
| To GenomeBrowser | scaffold1410.1:145516..152220 |
| Genes list of scaffold | scaffold1410.1 |
| Synonym | pfu_aug1.0_41344.1_19815 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1410.1_01612.t1 | 1 | 1 | AAA_22 | 429 | 529 | 4.4e-06 | 26.8 | 6.1e-09 | 1.5e-05 | 25.1 |
| pfu_aug2.0_1410.1_01612.t1 | 1 | 1 | NACHT | 433 | 531 | 2.4e-12 | 46.8 | 2.3e-15 | 5.7e-12 | 45.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1410.1_01612.t1 | gi|260802548|ref|XP_002596154.1| | hypothetical protein BRAFLDRAFT_118033 [Branchiostoma floridae] | 8.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1410.1_01612.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1410.1_01612.t1 atgcttactccttccgggcacctgatcccacctcagccttgctatgggtctgtcgatgctaaatgcggtgctctgttact gaactgcagaacagatctccccccatcaatgatacaagaacaaagtatagagaaaattttggatttcctagaacgagacg gaaaatttagtgaaggaaattacaactccatcaaggagaaaacagcagacgtccatgtggagataagtatgcttatacag caagcagaagcaaggattaaggaaatccgagcaaattccttgatggtaaaaacttttgtaacagaagttgatccaattga cgtagagaaggagaccagagaagaagtggatctcatactattggcagcatctgagaaattattatgcaggtctgaggatg atgacgaagatgctagtggcttattggagagataccaagatttaaatactttgtcagataactttcttactatttggcac aaggagttttgcaaatgtcgaaagcaatatggacggcggttgctgttacaatatgtaagacaaggggcgcgtttcttaga acaaggagaaaacaaatttgatagattcagacgaaacatagcacccaaattactgaaaactttgaaaaaaagttcgagta ctacattgcatgtcttcaataactgtggggcgtcccttgtgtccgtcgttccctcttcagttttgtccttctggatattt gacagcgttatcaacttggataagttatggaggaaatatgaagaggaaggtctacacgtcaatttacaggaaatattcaa tacgaatgacgttctaagcctgttaaacgttgacaaaatatcactaaatatcacaatagagaaatcaaattatctgacgt acagacaaatattagcggagaaagatccagagacagcttatttgacagcatctcttcaaactcttgagataagtgttgct gataaatccatggaaacttctgacatggatctgaaacagcggctgtatgaaataaataaacgacggtctgagaccccgac tgtcctatcttaccttttacaatcagacgatataccgaaaatggagccattatatgcatcagtttctctattggaattcg attgtattattgattttttggaagagccaggtcacgttgcgttttcccttaatcaaaaggatatcagaaagattaaaaac atacctgatgaactattctgcacctccgatgaatattcttgggaaagaaacatatattttgatgacagcatagtctccaa cagaaactctacatgtgttttcatactaggggaagctggatatggcaagacaacttactgtcaccatcttctaagacaat ggtgtcaaggcaaggaattacagaaatttgactatgtcttttatgtggattcttccgtcttgcaaaccccaaggacatca atgtctgatcttatttcttcatctcttttcggagacgatatgcaagatcacgtggaccatgctttacgaaagaaaaaatg tctcgttttaatagacggagttgagtactttagagatatcgtgaatggaaaatatgaattgcaaacgttagtcagagatt atcgttattgtgttgttgtcactcttatgcgacctctagactttgtgtatgcaatatcatcacattcatttgctcctgtt gaggtcaccacacgagtgatacagtttttaggactagatgaacaggataggacatcgcttttttatgatatcattgtcca aagatatgaaattaaacaatcagaacaacgacataaaataaggaaggtcgattttcaacaaaacacgaaggactctattc tacagactgacccaaaagattcttatgcttttcctgttgccaaagaatcagactctgactttgcaattagggatccttgt tcctttacatacattgaatga |
|
Protein
| Protein ID | pfu_aug2.0_1410.1_01612.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1410.1_01612.t1 MLTPSGHLIPPQPCYGSVDAKCGALLLNCRTDLPPSMIQEQSIEKILDFLERDGKFSEGNYNSIKEKTADVHVEISMLIQ QAEARIKEIRANSLMVKTFVTEVDPIDVEKETREEVDLILLAASEKLLCRSEDDDEDASGLLERYQDLNTLSDNFLTIWH KEFCKCRKQYGRRLLLQYVRQGARFLEQGENKFDRFRRNIAPKLLKTLKKSSSTTLHVFNNCGASLVSVVPSSVLSFWIF DSVINLDKLWRKYEEEGLHVNLQEIFNTNDVLSLLNVDKISLNITIEKSNYLTYRQILAEKDPETAYLTASLQTLEISVA DKSMETSDMDLKQRLYEINKRRSETPTVLSYLLQSDDIPKMEPLYASVSLLEFDCIIDFLEEPGHVAFSLNQKDIRKIKN IPDELFCTSDEYSWERNIYFDDSIVSNRNSTCVFILGEAGYGKTTYCHHLLRQWCQGKELQKFDYVFYVDSSVLQTPRTS MSDLISSSLFGDDMQDHVDHALRKKKCLVLIDGVEYFRDIVNGKYELQTLVRDYRYCVVVTLMRPLDFVYAISSHSFAPV EVTTRVIQFLGLDEQDRTSLFYDIIVQRYEIKQSEQRHKIRKVDFQQNTKDSILQTDPKDSYAFPVAKESDSDFAIRDPC SFTYIE |
|