Gene
| Gene Model ID | pfu_aug2.0_1414.1_15027 |
|---|---|
| Locus | scaffold1414.1 : 148198 ... 150925 : - |
| To GenomeBrowser | scaffold1414.1:148198..150925 |
| Genes list of scaffold | scaffold1414.1 |
| Synonym | pfu_aug1.0_175952.1_42885 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| er membrane protein complex subunit 4 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1414.1_15027.t1 | 1 | 1 | DUF1077 | 50 | 121 | 6.2e-30 | 103.1 | 5.6e-34 | 8.3e-30 | 102.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1414.1_15027.t1 | gi|524908924|ref|XP_005109551.1| | PREDICTED: ER membrane protein complex subunit 4-like isoform X1 [Aplysia californica] | 5.99756e-43 |
| pfu_aug2.0_1414.1_15027.t1 | gi|524908926|ref|XP_005109552.1| | PREDICTED: ER membrane protein complex subunit 4-like isoform X2 [Aplysia californica] | 1.00053e-42 |
| pfu_aug2.0_1414.1_15027.t1 | gi|676494244|ref|XP_009066499.1| | hypothetical protein LOTGIDRAFT_108713 [Lottia gigantea] | 2.0e-38 |
| pfu_aug2.0_1414.1_15027.t1 | gi|675847072|ref|XP_009009096.1| | hypothetical protein HELRODRAFT_184819 [Helobdella robusta] | 3.0e-38 |
| pfu_aug2.0_1414.1_15027.t1 | gi|260819286|ref|XP_002604968.1| | hypothetical protein BRAFLDRAFT_126700 [Branchiostoma floridae] | 6.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_1414.1_15027.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1414.1_15027.t1 atgagtacgaaacgcaaacttcacaagtggtcgattgattttacgggatatggaaggccaaagtcggacagacagttggt acctgtcaacacagatctcgcgcggcctgtaggctttgatgataatctgaacaaatctattagtgataaaacaggagaag atgccgaccaaaagctgattgataagagatcatgggacatagccttgggtccattgaagcagattccgatgaatttcttc atcatgtggatggcggggaattccatctctattttcccaattatgatggtcggaatgatgttctttagaccaatacaggc tctcctggcagcacaaaacacttttaaaatgatagagggatctnaccactatcttgtgaacgacccaccacacttcattt gggggtgcatcggttggtctccatttccgcatgaggatgccatcttgtatgtagaagcactttccgactttgtccgcttc ttctcggggaagggccctcttgcttag |
|
Protein
| Protein ID | pfu_aug2.0_1414.1_15027.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1414.1_15027.t1 MSTKRKLHKWSIDFTGYGRPKSDRQLVPVNTDLARPVGFDDNLNKSISDKTGEDADQKLIDKRSWDIALGPLKQIPMNFF IMWMAGNSISIFPIMMVGMMFFRPIQALLAAQNTFKMIEGSXHYLVNDPPHFIWGCIGWSPFPHEDAILYVEALSDFVRF FSGKGPLA |
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