Gene
Gene Model ID | pfu_aug2.0_1418.1_28274 |
---|---|
Locus | scaffold1418.1 : 17456 ... 43448 : + |
To GenomeBrowser | scaffold1418.1:17456..43448 |
Genes list of scaffold | scaffold1418.1 |
Synonym | pfu_aug1.0_2172.1_58810 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1418.1_28274.t1 | 1 | 1 | Chorein_N | 3 | 93 | 1.5e-16 | 60.0 | 4.4e-20 | 6.5e-16 | 57.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1418.1_28274.t1 | gi|676447547|ref|XP_009051443.1| | hypothetical protein LOTGIDRAFT_104431 [Lottia gigantea] | 0.0 |
pfu_aug2.0_1418.1_28274.t1 | gi|426373815|ref|XP_004053782.1| | PREDICTED: UHRF1-binding protein 1-like isoform 2 [Gorilla gorilla gorilla] | 0.0 |
pfu_aug2.0_1418.1_28274.t1 | gi|55749659|ref|NP_001006948.1| | UHRF1-binding protein 1-like isoform b [Homo sapiens] | 0.0 |
pfu_aug2.0_1418.1_28274.t1 | gi|332840142|ref|XP_003313931.1| | PREDICTED: UHRF1-binding protein 1-like isoform X4 [Pan troglodytes] | 0.0 |
pfu_aug2.0_1418.1_28274.t1 | gi|15928859|gb|AAH14891.1| | UHRF1 binding protein 1-like [Homo sapiens] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_1418.1_28274.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1418.1_28274.t1 atggcatcgataataaagaatcaaattttgaagcatctttcaaaatttacaaagaatctgtctcaagaccagatcaatgt cagcacactcaagggagaaggagagctcaacaatctggagttaaacgagacagttatgatggagctactggatctaccaa catggatgaaacttactcaggccacttgtaataaagtatctgctaagattcagtggacaaaactaaaatcccagcctata tctttgtattttgatgaagtggaactagtaatagagacgtgtgaagatcctcggccaccaaacagtcctgctcaccatgc tagttataggtactgtatatgtgtacatcataattataaacgtcctcggccaccaaacagtcctgctcaccatgctagtt ataggtcaggagggaagtatggctttgcagatagagttattgatggtatttacttacatgtgaactctgtccttgtcaaa ttcctgtctaagaaatttcaagcttccttgcagctgtctcgagtaagagttcagagtgtggcaccaaactggaaaccttg taatgacctcggtccaaccaaaataagggactcagagaggggtgaaattctgctgtttaaggaagtagactggcagacta cacgtatagaggctacagcagtagaaggggagagtttagagtcatttactagcacaccattacgtcttatagctaaccag tgtaaacttagaattaccatcaaaaagagactcagtgattgtggtatcatagctactcgattgatgttactcctggatga cttgttatgggtactgacagattctcaactgaaagctgccatcctctatgtaaactcactcaaaggaatgatggagaaat ctagatctcagagcaaaaatcaagcagcagaaaaactacatatacagggacagagctcagaagaaagggcagctcaacag caacacgaacaacagcagcaacaaaacgctcgtgcacgcagccaatccaacacgcacatagccaatctcttctcacgatt tgacgtcccaacaacaacatatcatgtgatcaccagcaggattgaccttcacctctgtgatgattctactccaggatcaa acaaacatccagatcataacagcttgatagagggaggggctatgcagatcacgctgaataaattgtctatagatatctat ccctataacagggcaggtggagagcgtaaacactggtaccgatacatggacaatcagggatccaggaacatgtgggttca gcagctgtttgcagactttaaggcagatgctaccagggccagagatacatgtcatatcccatcaccatcacaatctccat cccataaacctcagcagaagattccagccaatcagaatgcacctaacaagcaagctccacccagacctccccctccagcc tctcatccaacaagcagtcagaatacgaattcaagcaagaaaccaaggcctacgaagcttttagagagctgctatgtgtt taagctggaggactttgctatttatcaagtatccactgctgacaataaaagaaacactcccaaaaaattcctggcctccg ataaaaagacgctacatctacctgcagacatgtctgtcatacatgcagaattcacagattatttcttcccagaaggcgtc aactttcctgtttactatttagattgtttaanaaagaaagattcccgttatgatatatggtgcattaaggcagagcaagt atggttagaatttgtcgaacttggaactaaaaatagaccacaaccatttgtagattctataccattaactctttggatat gtagaccatttgatgatgagaatggaaaaagggaaagaagtgaaaggagtagaaaagaggaatctgaagtaaagaaaatg ccgctgaaaaggttgtatgatcaagggaaatgtagcaaagttggtgaggaaagtcacagagaaaatcgccgctctagacg gttgttaaaagatttttattcagatgagaaggattcatttgaggaaagcaatgtacaacaaagatctcaagaaaactgtg ataattcagaatcaggtgctttagtgaacaatggaggttgtcaagggacaggcattgaacaaacctttttatctcaagtt gctacaatcaacattctagcaaaaataggacaagggtgtgttaaagtccaaattacgcatttccaatatttgttccttat gagacttttagactctttcaccacctttcagtcccaaatgaacgctgatatggagttctttattggtggagtacaatccc cttccctaactttttcaattccattgttagtcccggagtttgaagtagtgatggttattccggaggtaacagagttacct ccccctgaaagcactaggtcgccatctataatcagttcaaaagacgaactggaagaggaaaaggaaaaagatgaggcagt ttttcccgctgacagcacatgtaatgaagacaaggctatggaaactacaactcttgatcattccccagacaagttaaaag cgaagatggaaatcggagatgacaaacacttggatattgaagattatgataacatatccataaggacagatacctctgaa gaagatatggattttgaacttttgtcgttagaagaggatggtccaattttccaacgtaaaagagattcagaaacaaattc agtttccacagatacagacctaatggaagactcatcatcatatgctgacagctctgtcgtcacaaaagggaaggaaatgg tatcagtgattgccttcaagctatgtgggatagagttgttactatccagtgatggttctcagacgactgccagtacacag gctatgagactcctaacatcacagtacagacacatgcagtatgatgatctacagaggaaattctcatctaatactgggga ggatccagaatctttggcagaggcagatttgatgaaggaaataaaagcattgaaactaaaaaacaaatcgctgtctgatg aactcaagtctgtagaaattaggaccaagaatgttgactcgctagaggaggaaaatcattctctgaaggagcaacttaaa aagtttgccgattgtaacatgactgatgaagataacgtgaaaagtgtggaagttctcatgaaagaaaactggtattctca tatgtaccacacttgtacttag |
Protein
Protein ID | pfu_aug2.0_1418.1_28274.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1418.1_28274.t1 MASIIKNQILKHLSKFTKNLSQDQINVSTLKGEGELNNLELNETVMMELLDLPTWMKLTQATCNKVSAKIQWTKLKSQPI SLYFDEVELVIETCEDPRPPNSPAHHASYRYCICVHHNYKRPRPPNSPAHHASYRSGGKYGFADRVIDGIYLHVNSVLVK FLSKKFQASLQLSRVRVQSVAPNWKPCNDLGPTKIRDSERGEILLFKEVDWQTTRIEATAVEGESLESFTSTPLRLIANQ CKLRITIKKRLSDCGIIATRLMLLLDDLLWVLTDSQLKAAILYVNSLKGMMEKSRSQSKNQAAEKLHIQGQSSEERAAQQ QHEQQQQQNARARSQSNTHIANLFSRFDVPTTTYHVITSRIDLHLCDDSTPGSNKHPDHNSLIEGGAMQITLNKLSIDIY PYNRAGGERKHWYRYMDNQGSRNMWVQQLFADFKADATRARDTCHIPSPSQSPSHKPQQKIPANQNAPNKQAPPRPPPPA SHPTSSQNTNSSKKPRPTKLLESCYVFKLEDFAIYQVSTADNKRNTPKKFLASDKKTLHLPADMSVIHAEFTDYFFPEGV NFPVYYLDCLXKKDSRYDIWCIKAEQVWLEFVELGTKNRPQPFVDSIPLTLWICRPFDDENGKRERSERSRKEESEVKKM PLKRLYDQGKCSKVGEESHRENRRSRRLLKDFYSDEKDSFEESNVQQRSQENCDNSESGALVNNGGCQGTGIEQTFLSQV ATINILAKIGQGCVKVQITHFQYLFLMRLLDSFTTFQSQMNADMEFFIGGVQSPSLTFSIPLLVPEFEVVMVIPEVTELP PPESTRSPSIISSKDELEEEKEKDEAVFPADSTCNEDKAMETTTLDHSPDKLKAKMEIGDDKHLDIEDYDNISIRTDTSE EDMDFELLSLEEDGPIFQRKRDSETNSVSTDTDLMEDSSSYADSSVVTKGKEMVSVIAFKLCGIELLLSSDGSQTTASTQ AMRLLTSQYRHMQYDDLQRKFSSNTGEDPESLAEADLMKEIKALKLKNKSLSDELKSVEIRTKNVDSLEEENHSLKEQLK KFADCNMTDEDNVKSVEVLMKENWYSHMYHTCT |