Gene
| Gene Model ID | pfu_aug2.0_1418.1_28276 |
|---|---|
| Locus | scaffold1418.1 : 59496 ... 61603 : + |
| To GenomeBrowser | scaffold1418.1:59496..61603 |
| Genes list of scaffold | scaffold1418.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1418.1_28276.t1 | 1 | 1 | Lectin_C | 49 | 155 | 1.9e-19 | 70.2 | 1.9e-23 | 2.9e-19 | 69.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1418.1_28276.t1 | gi|260792667|ref|XP_002591336.1| | hypothetical protein BRAFLDRAFT_216499 [Branchiostoma floridae] | 2.0e-15 |
| pfu_aug2.0_1418.1_28276.t1 | gi|260783074|ref|XP_002586603.1| | hypothetical protein BRAFLDRAFT_178341 [Branchiostoma floridae] | 3.0e-15 |
| pfu_aug2.0_1418.1_28276.t1 | gi|260781918|ref|XP_002586042.1| | hypothetical protein BRAFLDRAFT_255542 [Branchiostoma floridae] | 3.0e-15 |
| pfu_aug2.0_1418.1_28276.t1 | gi|260783094|ref|XP_002586613.1| | hypothetical protein BRAFLDRAFT_178313 [Branchiostoma floridae] | 7.0e-15 |
| pfu_aug2.0_1418.1_28276.t1 | gi|426237460|ref|XP_004012678.1| | 7.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_1418.1_28276.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1418.1_28276.t1 atgacgtatatttgggactctactgggaaaagtattcacgacttggatccggaccaatgctacttctatacaggagatga accacgtttgagtgactatttgttcaacagaagactaaatttttcattcaaagcccacaaagaaactgcgagatggagga cagcttttcgcaaatgtcaaagagaaaaagctcaactagtgaccataaagtcggaggaaaaaaatgacttcatttcaaaa tttgcttcacgtctttacattggaatctcggatctgaacaataccggtgaatggaagtggcaagatggtagctccgtgga gacctataacaacttttccccaaaccaaccaaataaccacgatggtaaagctcccggtgagctagcattatgtggagcga tgtcaaggctgggtgtctggatggacatctactgtgaacgcaaaaagttattcctctgtgagaaacattacagaaagaaa taa |
|
Protein
| Protein ID | pfu_aug2.0_1418.1_28276.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1418.1_28276.t1 MTYIWDSTGKSIHDLDPDQCYFYTGDEPRLSDYLFNRRLNFSFKAHKETARWRTAFRKCQREKAQLVTIKSEEKNDFISK FASRLYIGISDLNNTGEWKWQDGSSVETYNNFSPNQPNNHDGKAPGELALCGAMSRLGVWMDIYCERKKLFLCEKHYRKK |
|