Gene
| Gene Model ID | pfu_aug2.0_14186.1_23063 |
|---|---|
| Locus | scaffold14186.1 : 1 ... 2887 : - |
| To GenomeBrowser | scaffold14186.1:1..2887 |
| Genes list of scaffold | scaffold14186.1 |
| Synonym | pfu_aug1.0_9454.1_46039 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_14186.1_23063.t1 | 3 | 1 | Ig_3 | 3 | 32 | 9.7e-12 | 45.2 | 3.6e-05 | 0.077 | 13.5 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 1 | I-set | 10 | 32 | 3.0e-21 | 75.0 | 0.00013 | 0.28 | 11.0 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 1 | ig | 11 | 31 | 8.6e-16 | 57.8 | 0.00016 | 0.34 | 11.0 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 1 | V-set | 11 | 34 | 2.6e-13 | 49.8 | 6.6e-05 | 0.14 | 12.0 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 1 | Ig_2 | 14 | 35 | 2.2e-15 | 56.5 | 0.00041 | 0.86 | 9.7 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 2 | V-set | 71 | 133 | 2.6e-13 | 49.8 | 1.2e-07 | 0.00025 | 20.9 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 2 | I-set | 72 | 134 | 3.0e-21 | 75.0 | 3.3e-10 | 7.0e-07 | 29.0 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 2 | Ig_3 | 75 | 132 | 9.7e-12 | 45.2 | 6.7e-09 | 1.4e-05 | 25.4 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 2 | ig | 78 | 129 | 8.6e-16 | 57.8 | 1.9e-11 | 4.0e-08 | 33.2 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 2 | Ig_2 | 78 | 133 | 2.2e-15 | 56.5 | 7.0e-09 | 1.5e-05 | 25.0 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 3 | I-set | 168 | 248 | 3.0e-21 | 75.0 | 6.4e-11 | 1.4e-07 | 31.3 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 3 | Ig_2 | 176 | 255 | 2.2e-15 | 56.5 | 1.0e-06 | 0.0021 | 18.1 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 3 | Ig_3 | 176 | 241 | 9.7e-12 | 45.2 | 0.019 | 39.0 | 4.8 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 3 | V-set | 183 | 248 | 2.6e-13 | 49.8 | 3.3e-05 | 0.07 | 13.0 |
| pfu_aug2.0_14186.1_23063.t1 | 3 | 3 | ig | 184 | 241 | 8.6e-16 | 57.8 | 9.8e-05 | 0.21 | 11.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_14186.1_23063.t1 | gi|617605809|ref|XP_007523887.1| | PREDICTED: hemicentin-1 [Erinaceus europaeus] | 3.0e-16 |
| pfu_aug2.0_14186.1_23063.t1 | gi|340712175|ref|XP_003394639.1| | 1.0e-15 | |
| pfu_aug2.0_14186.1_23063.t1 | gi|350413972|ref|XP_003490168.1| | 1.0e-15 | |
| pfu_aug2.0_14186.1_23063.t1 | gi|242015091|ref|XP_002428207.1| | lachesin precursor, putative [Pediculus humanus corporis] | 1.0e-15 |
| pfu_aug2.0_14186.1_23063.t1 | gi|572299528|ref|XP_006615890.1| | PREDICTED: opioid-binding protein/cell adhesion molecule homolog isoform X2 [Apis dorsata] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_14186.1_23063.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14186.1_23063.t1 atacaggaaagcacagatgaggatgtttatatctccgtacttactgttagggacttggtaaaatcagactcgggacggta tagatgtgtagtcagaacccgggaaattccctcgccgaagttttgggcgaaaaaagagggtcttctagatatattagagc ctcccgtcatcacaaccctagtatcaaatgtcggtctagcaaatcagagaatattggtcggacccgatgttaatgttaca atatcctgtgctgcttccggtaaaccggaaccatcagtgcaatggtggagaactgatcgcatttccggtagagagaaaat ggagaagggtggcgagttacgttttgataatttaacattagtagataccggaacttacatgtgcattgcagacaacggaa tcgaaccgtttgcaaatatgtccgtttttgttggaatgaagaccaaggaattgaaatgctctaaaccaacactggacata gctaactgcattagtcctctagacgaaaaattggaaatcgactttcaaattgaaggttttcctttaagcactgtaaagtg gtacaaagattctgtcgaggtggcaaaaataatgcccgggacggaatcagattcaaattcccgcctaaatctggctgaga gggaatctcaggaatttgattggaacatacatttctacagattgactgtgtataacgtcaccatggaggacaccggaagt taccattacactgcttcaaataaggacatctcctgcatatcgtactttaatttgacagatatctgcccagataccggaag ccaaaaaccagatccagggaatgctgggaaatcagtagttgcgtcatctcccataaatatttttgccgttatagccttct ttgcatttctgcagcagtaa |
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Protein
| Protein ID | pfu_aug2.0_14186.1_23063.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_14186.1_23063.t1 IQESTDEDVYISVLTVRDLVKSDSGRYRCVVRTREIPSPKFWAKKEGLLDILEPPVITTLVSNVGLANQRILVGPDVNVT ISCAASGKPEPSVQWWRTDRISGREKMEKGGELRFDNLTLVDTGTYMCIADNGIEPFANMSVFVGMKTKELKCSKPTLDI ANCISPLDEKLEIDFQIEGFPLSTVKWYKDSVEVAKIMPGTESDSNSRLNLAERESQEFDWNIHFYRLTVYNVTMEDTGS YHYTASNKDISCISYFNLTDICPDTGSQKPDPGNAGKSVVASSPINIFAVIAFFAFLQQ |
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