Gene
| Gene Model ID | pfu_aug2.0_1420.1_01613 |
|---|---|
| Locus | scaffold1420.1 : 3116 ... 16256 : + |
| To GenomeBrowser | scaffold1420.1:3116..16256 |
| Genes list of scaffold | scaffold1420.1 |
| Synonym | pfu_aug1.0_13365.1_17992 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1420.1_01613.t1 | 2 | 1 | AMP-binding | 74 | 191 | 0.0 | 236.9 | 2.1e-15 | 5.1e-12 | 44.8 |
| pfu_aug2.0_1420.1_01613.t1 | 2 | 2 | AMP-binding | 248 | 663 | 0.0 | 236.9 | 0.0 | 0.0 | 189.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1420.1_01613.t1 | gi|524873001|ref|XP_005093254.1| | PREDICTED: uncharacterized protein LOC101864673 [Aplysia californica] | 9.00054e-42 |
| pfu_aug2.0_1420.1_01613.t1 | gi|499550310|ref|WP_011231093.1| | MULTISPECIES: AMP-binding protein [Geobacillus] | 2.0e-37 |
| pfu_aug2.0_1420.1_01613.t1 | gi|676419935|ref|XP_009043610.1| | hypothetical protein LOTGIDRAFT_227779 [Lottia gigantea] | 7.0e-37 |
| pfu_aug2.0_1420.1_01613.t1 | gi|503879968|ref|WP_014113962.1| | AMP-binding protein [Bacillus subtilis] | 2.0e-36 |
| pfu_aug2.0_1420.1_01613.t1 | gi|39996205|ref|NP_952156.1| | 6.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_1420.1_01613.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01613.t1 atgtcccatatgagtatgaacctgttacacgcccttgctctagggcttacaactgtgttaaatttgctccttaagaaaaa aaattcaccagcttggttgttcttcttcttcggggcacagatgcatgaagcatggcctcttcatttctactttcaacgaa acgatggctcagacgtctcggcatggcttaaggaaagtgagtaacggttacaagtcctggcggagcagaccccagagaag gaagctattgtattcgtccacgaacagaaaagaattgggataacctacaaggaaatttttgatggtgcttcggacattgc aaagaaaatgctgacgttaggaataaacaaaaacgatgtagttgccgtccatgatgataaaacacccgcatggctattta acacattcggggcgcaaatgtgcggtgcatggcctcttcatttttacttccaacggaaagatggtacagatgtcgctgcc attctgaagagaagtggctgtaagattgtcattacacaaccagggaatggagacgaatacattcagatcatgaaatcttt tattcagtttaatgaagacggagccgttcagagtgaaagtgtaccttccttgaggcaggttttgttcaccataaagccag aaagtttgcaaaacccttccacttttgatgaaattctgccatctgcaaaagatttaccacttattgaaccggaggatatt gctgagcggttacaaatgctagcaaagcagaccccggacaaagaagctattgtgtttgttggagaacagaaaagaatcgg agtaacatatcaggaaattgttgatggagctttggaaatggctaggaaaatgctgacgataggaataaagaaaaatgacg tagtggctatccatgatgataagtctccgtcttggttgttttacacatttggggcacaaatgtgtggtgcgtggcctctg catttctattttcaacggaaagatggctcagatgtcgcggacattttgaagagaagtggttgtaagattgtcatttcaca accaggggagggagacgaatacattcagatcatgaaatctttccttcagttcaaaggagatggcaaagttgaaagtaaga atgttcctaccttgaaacaggttttgctgaccagaaagccagcaagtttgcaaaatcctttgacttttgacgaaatattg ccgtcttcaaaagatttgcctctaactgaaccggaggatattgctggtattttctgttcttctggatccactggtttacc aaaaatgatttcttggagtcacactaacacgattgcttcagctttatctactttggaaaggctcgaattcacagaaggac agtcatatttttgcgacaggacattcggttggatcggtggatatccaagggaaatatttattggcataaggagagtaacg aactcgacaacatttaaagagaaaaatgtaaaagaggtatgtgatgcaacagtaaggatcatcaatcaggaaaattgtga acacgttgttcttttctcaactacaatagatgagctcatgaaaggtaactatatgatgaaacctgtacaaacgattgcca caggagggggaccaatatcggcgaaagattcacagttagttggaaagttctgtcaaaaattcatccatgcatatggatca actgaaaatggagctatttcgctgaatgtcataactagtgagcagaagatgaaaagctatgacacgggagtaccgttccc tggtatagaggtaaaggtgacagacatgaacggttgtttgtctgaagtgggagatgttggggaagtgtatgtcagaaata gattaagctccacgggatacttacatgaagaacaagactggcataaatccaacagagtagaaggatactggttcaaaact ggtgattctggatatatatcaggagatggccatctttttgtcgcaggtcgcatcagtgaggcgataatgattgagggaaa gatattatccccatcacattttgaggacatatttaagagaaatccctatgttgaggatgtagttgcttttggaataccag atgaagtattttatgaggtggcaggtcttgcagtattacttaaggaaggaaaatctgtctgtatggaagagctgctggag ttttacaaaatcgagagaagcttacgatatgatgatagcttttacgcgtcaaagtttgtaccgcgacagatcgtattttt cgatagtttcccaatgacaaatagtgggaagattgcccgcaaattagttaaagagatggcattggaaaagattggtttcc atggcaggaagaattaa |
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Protein
| Protein ID | pfu_aug2.0_1420.1_01613.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01613.t1 MSHMSMNLLHALALGLTTVLNLLLKKKNSPAWLFFFFGAQMHEAWPLHFYFQRNDGSDVSAWLKESEXRLQVLAEQTPEK EAIVFVHEQKRIGITYKEIFDGASDIAKKMLTLGINKNDVVAVHDDKTPAWLFNTFGAQMCGAWPLHFYFQRKDGTDVAA ILKRSGCKIVITQPGNGDEYIQIMKSFIQFNEDGAVQSESVPSLRQVLFTIKPESLQNPSTFDEILPSAKDLPLIEPEDI AERLQMLAKQTPDKEAIVFVGEQKRIGVTYQEIVDGALEMARKMLTIGIKKNDVVAIHDDKSPSWLFYTFGAQMCGAWPL HFYFQRKDGSDVADILKRSGCKIVISQPGEGDEYIQIMKSFLQFKGDGKVESKNVPTLKQVLLTRKPASLQNPLTFDEIL PSSKDLPLTEPEDIAGIFCSSGSTGLPKMISWSHTNTIASALSTLERLEFTEGQSYFCDRTFGWIGGYPREIFIGIRRVT NSTTFKEKNVKEVCDATVRIINQENCEHVVLFSTTIDELMKGNYMMKPVQTIATGGGPISAKDSQLVGKFCQKFIHAYGS TENGAISLNVITSEQKMKSYDTGVPFPGIEVKVTDMNGCLSEVGDVGEVYVRNRLSSTGYLHEEQDWHKSNRVEGYWFKT GDSGYISGDGHLFVAGRISEAIMIEGKILSPSHFEDIFKRNPYVEDVVAFGIPDEVFYEVAGLAVLLKEGKSVCMEELLE FYKIERSLRYDDSFYASKFVPRQIVFFDSFPMTNSGKIARKLVKEMALEKIGFHGRKN |
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