Gene
| Gene Model ID | pfu_aug2.0_1420.1_01615 |
|---|---|
| Locus | scaffold1420.1 : 33426 ... 35312 : + |
| To GenomeBrowser | scaffold1420.1:33426..35312 |
| Genes list of scaffold | scaffold1420.1 |
| Synonym | pfu_aug1.0_2475.1_37283 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxisomal-coenzyme a synthetase | GO:0003729 GO:0005778 GO:0005782 GO:0033611 GO:0050203 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1420.1_01615.t1 | 2 | 1 | AMP-binding | 32 | 270 | 6.9e-34 | 116.9 | 2.2e-25 | 1.6e-21 | 76.1 |
| pfu_aug2.0_1420.1_01615.t1 | 2 | 2 | AMP-binding | 271 | 338 | 6.9e-34 | 116.9 | 1.5e-14 | 1.1e-10 | 40.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1420.1_01615.t1 | gi|524865193|ref|XP_005089427.1| | PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like [Aplysia californica] | 5.0e-25 |
| pfu_aug2.0_1420.1_01615.t1 | gi|573943028|ref|XP_006653896.1| | PREDICTED: 4-coumarate--CoA ligase-like 10-like [Oryza brachyantha] | 4.0e-24 |
| pfu_aug2.0_1420.1_01615.t1 | gi|596702707|ref|XP_007282864.1| | peroxisomal-coenzyme a synthetase [Colletotrichum gloeosporioides Nara gc5] | 3.0e-23 |
| pfu_aug2.0_1420.1_01615.t1 | gi|396461961|ref|XP_003835592.1| | hypothetical protein LEMA_P049330.1 [Leptosphaeria maculans JN3] | 6.0e-23 |
| pfu_aug2.0_1420.1_01615.t1 | gi|615440498|ref|XP_007591504.1| | AMP-binding enzyme [Colletotrichum fioriniae PJ7] | 2.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_1420.1_01615.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01615.t1 atgtttaaaagtaacgcaaagaaaagaagttatttatgtacgccatggaaactagatacactgttctgtaccgtcccaga tcggttacagttgatggcagagatgaacccggacaaagaagttataatttttgttggagaaaaggaaagagtgggtgtga cctatagggacattgtagatggagcctcaagtattgcgaggaaaatggtgacgataggcatacagaagaatgaaattgtt gctattcatgatgataagtctacttcctggttgtataatgcaatcggagcacagatgtgtggagcatggcctcttcatat ttcctttaatcgtagagatggctcagatgtcgctgacgttctgaaaaggagtagttgtaagactgtcattacacaaccgg gggatgatgacgaatacatccatatcatgaaaaacttcgttcattttaatgatgatggaactatatcaaaaatagaaccg gaagacattgctgcaattttctgttcttccggttcaactgggcctccgaagttggttccatggagtcacttcaacttgat tgctgcaactatgtcaatgtttgaggcatctgatatcaaatatggagagtcccttttctgcgacaaaacatttggttgga tcggtggatatcccagagagatgataatcggggtacaaagggttaccaacaccacaacattcaaagagaaaagtcttggt cagatttgtgactcaacagttaaaattatcaatgatgaaaattgtcggcacgctgttctctattcaactactattgaaca gatcatgaaagagggtcgattgtgtgaagttggcaaagtaggtgaaatttatgtaagaaatagaagtagctccacaggac atctgcatgaagaacaagactggcataaagccaacagagtggaaggatactggttcaaaactggggactctggatacatc tcagaagatggtcatttatttgtggcaggtcgaataagtgagtcgataattattgaaggcaaaatactatctccgtcaca ttttgaggacatcttaatcaaacatcccagtgttgaaaaagcggttgccttcggaataccagatgacgtgttatatgaaa aagtgggtgttgcagttacaataacagacgggaaatcgacttcatctgaagaacttatagcgttttacaaaatcgagaga agtttaaactttgacaatagctattacgcatcaaagtctctaccgaaacagatcttatttttcgatacctttccgatgac aaatagtgggaaaattgcacgcaaattagtgaaagaattagctttggaaaggatttgttcagaaaacaaaaaatga |
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Protein
| Protein ID | pfu_aug2.0_1420.1_01615.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01615.t1 MFKSNAKKRSYLCTPWKLDTLFCTVPDRLQLMAEMNPDKEVIIFVGEKERVGVTYRDIVDGASSIARKMVTIGIQKNEIV AIHDDKSTSWLYNAIGAQMCGAWPLHISFNRRDGSDVADVLKRSSCKTVITQPGDDDEYIHIMKNFVHFNDDGTISKIEP EDIAAIFCSSGSTGPPKLVPWSHFNLIAATMSMFEASDIKYGESLFCDKTFGWIGGYPREMIIGVQRVTNTTTFKEKSLG QICDSTVKIINDENCRHAVLYSTTIEQIMKEGRLCEVGKVGEIYVRNRSSSTGHLHEEQDWHKANRVEGYWFKTGDSGYI SEDGHLFVAGRISESIIIEGKILSPSHFEDILIKHPSVEKAVAFGIPDDVLYEKVGVAVTITDGKSTSSEELIAFYKIER SLNFDNSYYASKSLPKQILFFDTFPMTNSGKIARKLVKELALERICSENKK |
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