Gene
| Gene Model ID | pfu_aug2.0_1420.1_01618 |
|---|---|
| Locus | scaffold1420.1 : 53106 ... 62650 : + |
| To GenomeBrowser | scaffold1420.1:53106..62650 |
| Genes list of scaffold | scaffold1420.1 |
| Synonym | pfu_aug1.0_19976.1_61952 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1420.1_01618.t1 | 2 | 1 | ERGIC_N | 7 | 51 | 2.9e-07 | 30.3 | 1.3e-10 | 9.4e-07 | 28.7 |
| pfu_aug2.0_1420.1_01618.t1 | 1 | 1 | COPIIcoated_ERV | 56 | 224 | 7.6e-36 | 123.8 | 1.7e-39 | 1.2e-35 | 123.1 |
| pfu_aug2.0_1420.1_01618.t1 | 2 | 2 | ERGIC_N | 211 | 234 | 2.9e-07 | 30.3 | 0.11 | 820.0 | 0.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1420.1_01618.t1 | gi|676487122|ref|XP_009064192.1| | hypothetical protein LOTGIDRAFT_235919 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1420.1_01618.t1 | gi|524891458|ref|XP_005102262.1| | PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1420.1_01618.t1 | gi|260800124|ref|XP_002594986.1| | hypothetical protein BRAFLDRAFT_128968 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1420.1_01618.t1 | gi|585718935|ref|XP_006825973.1| | PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1420.1_01618.t1 | gi|533122115|ref|XP_005376400.1| | PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X2 [Chinchilla lanigera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1420.1_01618.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01618.t1 atgtgtacaggaagtgttagtgagttgacagttgaagatccagtaaaacattcagaaaagattcccgtgtttgtaaatat tacgttaccaaagatgaagtgtgaatatttaggattagatatacaagatgatatgggtagacatgaagtgggtttccaag acaacacacagaaagaagaaattaatgaaggcgcagggtgcagatttgaatctcattttatgatcaataaagtaccgggt aacttccatgtttccactcattcgtcacagagtcaaccggatgatccagacatgtcgcatactatacataaagtccgatt tggtatggacctcggtgaaggaaagtcagtggcagggtcttttaatcctctagaaaatgtcgataaaacaaaaggccaat cttttgccacccatgactatatcgtgaaaattgtaccgtcagtttacgaagactcctctggaaacatacgttttccctac cagtatacatactcctatagggaagttgtccagtttggccatggtggtcgcatgatgccagcaatttggttccgctatga cttaagtcctatcacagtacgatacaaggaaaaatggaagccattttatacattcttaacaacgatttgtgcaatagtag ggggaactttcacagtagctggcataatagattcctgtatatttacggcatcagaagtgttcaaaaaggcagagctcgga aaattaacgtaa |
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Protein
| Protein ID | pfu_aug2.0_1420.1_01618.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01618.t1 MCTGSVSELTVEDPVKHSEKIPVFVNITLPKMKCEYLGLDIQDDMGRHEVGFQDNTQKEEINEGAGCRFESHFMINKVPG NFHVSTHSSQSQPDDPDMSHTIHKVRFGMDLGEGKSVAGSFNPLENVDKTKGQSFATHDYIVKIVPSVYEDSSGNIRFPY QYTYSYREVVQFGHGGRMMPAIWFRYDLSPITVRYKEKWKPFYTFLTTICAIVGGTFTVAGIIDSCIFTASEVFKKAELG KLT |
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