Gene
| Gene Model ID | pfu_aug2.0_1420.1_01619 |
|---|---|
| Locus | scaffold1420.1 : 68117 ... 70225 : - |
| To GenomeBrowser | scaffold1420.1:68117..70225 |
| Genes list of scaffold | scaffold1420.1 |
| Synonym | pfu_aug1.0_178210.1_57376 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1420.1_01619.t1 | 1 | 1 | HlyIII | 1 | 169 | 6.7e-19 | 68.1 | 1.3e-22 | 9.4e-19 | 67.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1420.1_01619.t1 | gi|524901978|ref|XP_005107368.1| | PREDICTED: membrane progestin receptor beta-like isoform X1 [Aplysia californica] | 7.0e-28 |
| pfu_aug2.0_1420.1_01619.t1 | gi|676429759|ref|XP_009045705.1| | hypothetical protein LOTGIDRAFT_137083 [Lottia gigantea] | 1.0e-27 |
| pfu_aug2.0_1420.1_01619.t1 | gi|729732954|ref|XP_010562388.1| | PREDICTED: progestin and adipoQ receptor family member 6 isoform X1 [Haliaeetus leucocephalus] | 2.0e-21 |
| pfu_aug2.0_1420.1_01619.t1 | gi|597766216|ref|XP_007246990.1| | PREDICTED: membrane progestin receptor gamma-B-like isoform X2 [Astyanax mexicanus] | 3.0e-21 |
| pfu_aug2.0_1420.1_01619.t1 | gi|597762911|ref|XP_007245411.1| | PREDICTED: membrane progestin receptor beta [Astyanax mexicanus] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_1420.1_01619.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01619.t1 atgttcgcagcgagtagtgctgctcacttattttcgcacaagtccatcacaacgaattgtgtgcttttcatggcagatat ttctacaattggattatacggatttggaacaattttaaaccattaccattattctgttccgttgacattacaaggaacaa tcctacatcagtacgccgtgccattcggggtgttcgtttcagcggtcgtctgcctgagtggcggggccgctaaggtggtg tactccaatttacagtctaagatccgggttgttttgatggcagcttctataggagggctgtactatttctcaaatatacc gatactgtaccgtcttttccacgaagaatggacagacgtacattggtaccatgcaaaacaatacttttacttccactgta cagcatttttcttttgttcgcgaattcctgagcgatttttcccggggaggttcgacataatcggtaacagccatcaactt tttcacgttgccatggtgctttgtacggacagacatttggacggagttttagctgatgtagacaacatcgaccaatcaac gcacacatatccaggatacgaagcctgggcgggaccactacttttacttgtgatactaattgacgccgttattatgtttt tgttttatcgcttgcatttccattatctcttgccaaattctgacaagaaaaaggacagttga |
|
Protein
| Protein ID | pfu_aug2.0_1420.1_01619.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01619.t1 MFAASSAAHLFSHKSITTNCVLFMADISTIGLYGFGTILNHYHYSVPLTLQGTILHQYAVPFGVFVSAVVCLSGGAAKVV YSNLQSKIRVVLMAASIGGLYYFSNIPILYRLFHEEWTDVHWYHAKQYFYFHCTAFFFCSRIPERFFPGRFDIIGNSHQL FHVAMVLCTDRHLDGVLADVDNIDQSTHTYPGYEAWAGPLLLLVILIDAVIMFLFYRLHFHYLLPNSDKKKDS |
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