Gene
| Gene Model ID | pfu_aug2.0_1420.1_01623 |
|---|---|
| Locus | scaffold1420.1 : 142725 ... 157815 : - |
| To GenomeBrowser | scaffold1420.1:142725..157815 |
| Genes list of scaffold | scaffold1420.1 |
| Synonym | pfu_aug1.0_8344.1_53158 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| general transcription factor iif subunit 2-like | GO:0003824 GO:0005634 GO:0006366 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1420.1_01623.t1 | 1 | 1 | TFIIF_beta | 15 | 258 | 0.0 | 228.4 | 0.0 | 0.0 | 223.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1420.1_01623.t1 | gi|676496263|ref|XP_009067160.1| | hypothetical protein LOTGIDRAFT_135195 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1420.1_01623.t1 | gi|383858209|ref|XP_003704594.1| | PREDICTED: general transcription factor IIF subunit 2 isoform X1 [Megachile rotundata] | 0.0 |
| pfu_aug2.0_1420.1_01623.t1 | gi|340719856|ref|XP_003398361.1| | PREDICTED: general transcription factor IIF subunit 2 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_1420.1_01623.t1 | gi|66564899|ref|XP_623868.1| | PREDICTED: general transcription factor IIF subunit 2 isoformX1 [Apis mellifera] | 0.0 |
| pfu_aug2.0_1420.1_01623.t1 | gi|380020787|ref|XP_003694260.1| | PREDICTED: general transcription factor IIF subunit 2 [Apis florea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1420.1_01623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01623.t1 atgtctgtacctcaaaacgtggagaaggctcacgaagcaaaagctgttgaacttggtgcagctggaaggggcgtttggtt agtcaaggtgccaaagtatttatcagagaaatggaaaaaagccccagcttcttgtgaagttggacaaatgaaaatcacca gatcaaaatttccaggtaaaaagccagatgtagtattctcactggatgagtcgttggctaaggcgggacctggggagaca gcctgcccaagggaacacaggatggtccttacggggctcggcaatcagaatctcgttatcttctcggagacgccagtcat ggtcaaatcagaatcgagtacaggtgttgtcagtgaagttgcatcagaaagacttggtatagagggcaaagtcatacaaa gagctgactgcaggccagaagctgataataattatctgaaactcaaaaggttacagttagaggcaaggaacaaaccccag agggaagtcaaacagctagatacagtggtacacaactataaacctattcctgccaattttaacaccaaagataagtcaaa agaagtggccaaacgacagcgggcagagaaagaacaagttatggaccttctatttaaagcttttgagaaacatcagtact acaatgtcaaagatcttgtcaacatcacaaaacagcccattacttacctcaaagagatactcaaggaaatatgtgtgtac aacatgaaagctccccacaggaacatgtgggaacttaaacccgagtacagacattacaaggacggcgaacaagccacttg a |
|
Protein
| Protein ID | pfu_aug2.0_1420.1_01623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1420.1_01623.t1 MSVPQNVEKAHEAKAVELGAAGRGVWLVKVPKYLSEKWKKAPASCEVGQMKITRSKFPGKKPDVVFSLDESLAKAGPGET ACPREHRMVLTGLGNQNLVIFSETPVMVKSESSTGVVSEVASERLGIEGKVIQRADCRPEADNNYLKLKRLQLEARNKPQ REVKQLDTVVHNYKPIPANFNTKDKSKEVAKRQRAEKEQVMDLLFKAFEKHQYYNVKDLVNITKQPITYLKEILKEICVY NMKAPHRNMWELKPEYRHYKDGEQAT |
|