Gene
| Gene Model ID | pfu_aug2.0_1421.1_05035 |
|---|---|
| Locus | scaffold1421.1 : 27826 ... 39837 : + |
| To GenomeBrowser | scaffold1421.1:27826..39837 |
| Genes list of scaffold | scaffold1421.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gtp-binding protein sar1b | GO:0005525 GO:0005783 GO:0005794 GO:0006886 GO:0016192 GO:0044446 GO:0098588 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1421.1_05035.t1 | 2 | 1 | Arf | 9 | 76 | 1.6e-40 | 138.2 | 3.3e-26 | 8.2e-23 | 80.5 |
| pfu_aug2.0_1421.1_05035.t1 | 2 | 2 | Arf | 81 | 166 | 1.6e-40 | 138.2 | 1.1e-18 | 2.6e-15 | 56.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1421.1_05035.t1 | gi|676480292|ref|XP_009062014.1| | hypothetical protein LOTGIDRAFT_210455 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1421.1_05035.t1 | gi|291235173|ref|XP_002737513.1| | PREDICTED: GTP-binding protein SAR1b-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1421.1_05035.t1 | gi|675873670|ref|XP_009022395.1| | hypothetical protein HELRODRAFT_185823 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1421.1_05035.t1 | gi|260814444|ref|XP_002601925.1| | hypothetical protein BRAFLDRAFT_124594 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1421.1_05035.t1 | gi|611975763|ref|XP_007474455.1| | PREDICTED: GTP-binding protein SAR1b [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1421.1_05035.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05035.t1 atgtttttatgggactggtttgctggaattttaaattttttaggtttatataagaagtctggcaagcttgttttcctggg cttagacaatgctggtaaaaccactctattacacatgctgaaggatgatcgcatggcacaacatgttcctacattacatc caacatcagaagaattatcaatgggaggaatgaggttcacaacatttgaccttggaggtcatcagcaaggacttcattat aatcaaggcctgaagagtttactgacagatgaacaagttgctaatgcaccagtattagttcttggtaataaaatagataa agcaggtgcagcaagtgaggatgaaatcagacactggtttggcctgcatggtcagacaactggaaagggcacagtggcac gcagtgagctacctggtcgtccaatggagttatttatgtgctctgtactaaagagagaaggatatggtgaagcattcaga tggctagcacaatacattaactga |
|
Protein
| Protein ID | pfu_aug2.0_1421.1_05035.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05035.t1 MFLWDWFAGILNFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRMAQHVPTLHPTSEELSMGGMRFTTFDLGGHQQGLHY NQGLKSLLTDEQVANAPVLVLGNKIDKAGAASEDEIRHWFGLHGQTTGKGTVARSELPGRPMELFMCSVLKREGYGEAFR WLAQYIN |
|