Gene
| Gene Model ID | pfu_aug2.0_1421.1_05036 |
|---|---|
| Locus | scaffold1421.1 : 41377 ... 61935 : - |
| To GenomeBrowser | scaffold1421.1:41377..61935 |
| Genes list of scaffold | scaffold1421.1 |
| Synonym | pfu_aug1.0_6636.1_67492 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1421.1_05036.t1 | 9 | 1 | Kazal_1 | 5 | 21 | 0.0 | 180.5 | 1.5 | 11000.0 | -3.6 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 2 | Kazal_1 | 30 | 80 | 0.0 | 180.5 | 1.6e-13 | 1.1e-09 | 38.0 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 1 | Kazal_2 | 43 | 80 | 0.0 | 175.1 | 1.2e-13 | 8.6e-10 | 38.3 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 3 | Kazal_1 | 106 | 113 | 0.0 | 180.5 | 1.5 | 11000.0 | -3.5 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 2 | Kazal_2 | 106 | 113 | 0.0 | 175.1 | 0.27 | 2000.0 | -1.2 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 4 | Kazal_1 | 169 | 216 | 0.0 | 180.5 | 4.4e-13 | 3.3e-09 | 36.6 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 3 | Kazal_2 | 173 | 209 | 0.0 | 175.1 | 1.9e-13 | 1.4e-09 | 37.6 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 4 | Kazal_2 | 223 | 230 | 0.0 | 175.1 | 0.69 | 5100.0 | -2.5 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 5 | Kazal_1 | 235 | 282 | 0.0 | 180.5 | 5.1e-14 | 3.8e-10 | 39.6 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 5 | Kazal_2 | 238 | 282 | 0.0 | 175.1 | 1.4e-14 | 1.0e-10 | 41.3 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 6 | Kazal_1 | 291 | 332 | 0.0 | 180.5 | 4.0e-07 | 0.0029 | 17.5 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 6 | Kazal_2 | 298 | 348 | 0.0 | 175.1 | 3.2e-05 | 0.24 | 11.3 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 7 | Kazal_1 | 376 | 423 | 0.0 | 180.5 | 1.5e-12 | 1.1e-08 | 34.9 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 7 | Kazal_2 | 383 | 416 | 0.0 | 175.1 | 2.0e-12 | 1.4e-08 | 34.4 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 8 | Kazal_2 | 430 | 437 | 0.0 | 175.1 | 0.69 | 5100.0 | -2.5 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 8 | Kazal_1 | 442 | 489 | 0.0 | 180.5 | 5.1e-14 | 3.8e-10 | 39.6 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 9 | Kazal_2 | 445 | 489 | 0.0 | 175.1 | 1.4e-14 | 1.0e-10 | 41.3 |
| pfu_aug2.0_1421.1_05036.t1 | 9 | 9 | Kazal_1 | 498 | 539 | 0.0 | 180.5 | 4.0e-07 | 0.0029 | 17.5 |
| pfu_aug2.0_1421.1_05036.t1 | 10 | 10 | Kazal_2 | 505 | 555 | 0.0 | 175.1 | 3.2e-05 | 0.24 | 11.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1421.1_05036.t1 | gi|675175191|ref|XP_008896480.1| | hypothetical protein PPTG_04341 [Phytophthora parasitica INRA-310] | 7.0e-35 |
| pfu_aug2.0_1421.1_05036.t1 | gi|301111962|ref|XP_002905060.1| | protease inhibitor Epi11 [Phytophthora infestans T30-4] | 4.0e-31 |
| pfu_aug2.0_1421.1_05036.t1 | gi|391333231|ref|XP_003741023.1| | PREDICTED: agrin-like [Metaseiulus occidentalis] | 3.0e-25 |
| pfu_aug2.0_1421.1_05036.t1 | gi|390350338|ref|XP_791472.3| | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_1421.1_05036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05036.t1 atggtggagtgtgaagcactgacgcacgatagagtcattggcctggccggacacggaccctgtaatggggtacccctcac ctacggctgtaacacaaataccacttgtgatgtgatgcaacttcagtccgtttgtggctcagatggggtaacctaccgaa atccttgtttattacaccaagcagcatgcaaactagctctgacaggaaagaagatgatcaagaagcatgatggagagtgt aggaatgcctgtattctaaagcagctatactgtaagtttgcccatacgggtccagcagatagcgttataccatatgaagt caaacataacggatcatgtgatcataaggagacacagaaacccaaggagataagaaataagtctttgttttatctactct gccctcagtctttacatttactgagagagtggacaacagacaaaatgttggcattcgcactgttattatgtattggtatg gcttacggccagacgataccccagtgtaacaaatattgtacggctcagtaccagccggtatgcggctcagaccaccatac atattcaaacctgtgcaagttacaaatagcccaatgtgaggccaagtataaacaccgtgtactgtaccaggtgggtactg gaccatgtcattccactgggggctctggcagccatggacaaacttactttgactgcagacaccaggatatctgtgatgac gagcagcttgatccagtttgtggaaacgatggggttacatacagaaacccttgcctactccatgaggcagcctgtgctaa agctaagacgggacataagatgatgcaagctcactcaggagagtgtagtgtgtacgaactcggcttggactgcagtcagc aacgctgtggcaacgatctcaaccctgtatgcagcaaaggaaacagcactttccgcaatttgtgtatgctccgacagatg tactgtcgatatgctagtcacggaggatccagtgtgtatgccaaattagccgagagatatacatttgatcataacgggac atgtgacggcactgatcctacccaaactaccatgaggcaggaaggtttattggggtgtgtggcttacggccagacgatac cccagtgtaacaagtattgtttatctcagtacaagcccgtatgcggctcagaccaccatacatattcaaacctgtgccag ctacaaatagcccaatgtgaggcaaaatataaacaccgtgtactgtaccaggtgggtactggaccatgtcattccaccgg gggctctggcagccatggacaaacttattttgactgcagacaccaggatatctgtgatgacgagcagcttgatccagtct gtggaaacgatggggttacttacagaaacccttgcctactccatgaggcagcctgtgctaaagctaagacgggacataag atgatgcaagctcactcaggagagtgtagtgtgtacgaactcggcttggactgcagtcagcaacgctgtggcaacgatct caaccctgtatgcagcaaaggaaacagcactttccgcaatttgtgtatgctccgacagatgtactgccgatatgctagtc acggaggatccagtgtgtatgccaaattagccgagagatatacatttgatcataacgggacatgtgacggcactgatcct acccaaactaccatgaacctgtctttacaagcaacagattatattactttgagtatttcagaacctgccttttatggtga tgtgataaacagaattagaaggataaacatcaaagaagtacctaacagttataaagtctcaaagtcgagaaggcaagtca aaatcgttagaattcacatgggaacggcggcgatccccgaaatgaacaagactccgaagtga |
|
Protein
| Protein ID | pfu_aug2.0_1421.1_05036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05036.t1 MVECEALTHDRVIGLAGHGPCNGVPLTYGCNTNTTCDVMQLQSVCGSDGVTYRNPCLLHQAACKLALTGKKMIKKHDGEC RNACILKQLYCKFAHTGPADSVIPYEVKHNGSCDHKETQKPKEIRNKSLFYLLCPQSLHLLREWTTDKMLAFALLLCIGM AYGQTIPQCNKYCTAQYQPVCGSDHHTYSNLCKLQIAQCEAKYKHRVLYQVGTGPCHSTGGSGSHGQTYFDCRHQDICDD EQLDPVCGNDGVTYRNPCLLHEAACAKAKTGHKMMQAHSGECSVYELGLDCSQQRCGNDLNPVCSKGNSTFRNLCMLRQM YCRYASHGGSSVYAKLAERYTFDHNGTCDGTDPTQTTMRQEGLLGCVAYGQTIPQCNKYCLSQYKPVCGSDHHTYSNLCQ LQIAQCEAKYKHRVLYQVGTGPCHSTGGSGSHGQTYFDCRHQDICDDEQLDPVCGNDGVTYRNPCLLHEAACAKAKTGHK MMQAHSGECSVYELGLDCSQQRCGNDLNPVCSKGNSTFRNLCMLRQMYCRYASHGGSSVYAKLAERYTFDHNGTCDGTDP TQTTMNLSLQATDYITLSISEPAFYGDVINRIRRINIKEVPNSYKVSKSRRQVKIVRIHMGTAAIPEMNKTPK |
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