Gene
| Gene Model ID | pfu_aug2.0_1421.1_05037 |
|---|---|
| Locus | scaffold1421.1 : 82886 ... 94639 : + |
| To GenomeBrowser | scaffold1421.1:82886..94639 |
| Genes list of scaffold | scaffold1421.1 |
| Synonym | pfu_aug1.0_5138.1_67176 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dexamethasone-induced ras-related protein 1 | GO:0000166 GO:0007165 GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1421.1_05037.t1 | 1 | 1 | Arf | 59 | 224 | 4.1e-06 | 26.1 | 5.0e-09 | 6.1e-06 | 25.5 |
| pfu_aug2.0_1421.1_05037.t1 | 1 | 1 | Ras | 60 | 223 | 1.49939e-43 | 148.0 | 0.0 | 2.00386e-43 | 147.5 |
| pfu_aug2.0_1421.1_05037.t1 | 1 | 1 | Miro | 60 | 180 | 3.8e-17 | 62.8 | 5.5e-20 | 6.9e-17 | 62.0 |
| pfu_aug2.0_1421.1_05037.t1 | 2 | 1 | GTP_EFTU | 60 | 82 | 3.2e-08 | 33.2 | 0.35 | 440.0 | 0.1 |
| pfu_aug2.0_1421.1_05037.t1 | 2 | 2 | GTP_EFTU | 96 | 217 | 3.2e-08 | 33.2 | 1.5e-10 | 1.8e-07 | 30.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1421.1_05037.t1 | gi|291231431|ref|XP_002735670.1| | PREDICTED: dexamethasone-induced Ras-related protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1421.1_05037.t1 | gi|242019611|ref|XP_002430253.1| | dexras1, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_1421.1_05037.t1 | gi|759044702|ref|XP_011331278.1| | PREDICTED: dexamethasone-induced Ras-related protein 1 isoform X1 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_1421.1_05037.t1 | gi|752884451|ref|XP_011259966.1| | PREDICTED: dexamethasone-induced Ras-related protein 1 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_1421.1_05037.t1 | gi|749783401|ref|XP_011145713.1| | PREDICTED: dexamethasone-induced Ras-related protein 1 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1421.1_05037.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05037.t1 atggaatctctgaataattgcaggcgcccttggagtcttatagttgagcgtggagaagacgcatcaggggaggggcaggg ggaaatttgtcgctgctggagccctggagtttcctcgtcgtctgcaaatatggctcttctggagcaaggtgacaatgctc ctcccgagaactgtcatagattggtgctattaggctcaagcaaagttgggaaaacttctattgtgtccagattcctctac aacaagtttgacgatagttatacaccaaccatagaggatttccatagaaagatttacaggattaaaggcgaaccttaccg cctggacatactagatacatctggaaatcatccttttccagcaatgagaaggctctcaattatcacgggtgacctgtttg tattagtgtacagtattgacaaccgtgaatccttcgaggaagtggtacgcttatgccaacagataagggaatgtaaaagc cagtgtttgaagggtaacggaagcaacattcctattgtgttactaggtaacaaatgtgacaaagagaaatctagaacaat tgatcagactgaagctatcaatcttgttgaacagaatgaaaattgcagattcatcgaaacatctgcaaaaaagaacatca acattgaagagtccttcatcagactttttgagatgggaaacttgcctgtagaaatgagtccctccctccatcgtaaggtc catccacagtacgtaggcggtagtcattcatcctcacaaaggaggggcatgtccatcagaagaaaaatgtcggacgcttg tggtacaatcgctccaaatgttcggcggcctagtatccgaactgatctcctcgtggcccaaatgagaacaaaaacatcaa aatcatcattgattggcgaatctagagaaaaatgtagtattcagtaa |
|
Protein
| Protein ID | pfu_aug2.0_1421.1_05037.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05037.t1 MESLNNCRRPWSLIVERGEDASGEGQGEICRCWSPGVSSSSANMALLEQGDNAPPENCHRLVLLGSSKVGKTSIVSRFLY NKFDDSYTPTIEDFHRKIYRIKGEPYRLDILDTSGNHPFPAMRRLSIITGDLFVLVYSIDNRESFEEVVRLCQQIRECKS QCLKGNGSNIPIVLLGNKCDKEKSRTIDQTEAINLVEQNENCRFIETSAKKNINIEESFIRLFEMGNLPVEMSPSLHRKV HPQYVGGSHSSSQRRGMSIRRKMSDACGTIAPNVRRPSIRTDLLVAQMRTKTSKSSLIGESREKCSIQ |
|