Gene
| Gene Model ID | pfu_aug2.0_1421.1_05038 |
|---|---|
| Locus | scaffold1421.1 : 97447 ... 121455 : - |
| To GenomeBrowser | scaffold1421.1:97447..121455 |
| Genes list of scaffold | scaffold1421.1 |
| Synonym | pfu_aug1.0_5138.1_67177 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1421.1_05038.t2 | 3 | 1 | cNMP_binding | 59 | 145 | 2.2e-26 | 91.4 | 3.3e-20 | 2.5e-16 | 59.2 |
| pfu_aug2.0_1421.1_05038.t2 | 3 | 2 | cNMP_binding | 185 | 221 | 2.2e-26 | 91.4 | 2.7e-07 | 0.002 | 17.8 |
| pfu_aug2.0_1421.1_05038.t2 | 3 | 3 | cNMP_binding | 414 | 461 | 2.2e-26 | 91.4 | 5.6e-05 | 0.42 | 10.4 |
Transcript
| Transcript ID | pfu_aug2.0_1421.1_05038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05038.t1 atgggttcagttgaccgattgccccaagaagctcgacgtatactgcagacacgacaagaggccagaactgataaagaaat agcctatctacaaatcgttctacgaggaataaaagcgttcacagaatacccacaaaagatgcagcgacgactctgtcaag ttggttggtatgaggcatatgaaccaaggcgtgccattataagacagcatcacccacctcattcgttctactttatcctg agtggaacagtaatggtgacagcgtttgataaggacaacggagggaccaaactccttgtcagtttacataaaggcatgtc ttttggagagcttgccgttattactaaaagacgccgtcaggctaccgtcagcacacagacacccacagaacttctttgta tttcttccttggacttcgaggaaatcttcatgtctggaggagtaaaaaatgtgaatgatcctgatcacaatacatttcta ggatctgtgcgcttcttgagagattggccggtacatctcctggcggagaaccctcaagcatgcttgttccattattttaa ccgaggggaaatcttagtcagagacagtaacagatcggattggatttacatcgtaaaatcggggagtctctcagtcatga agaaattgagggaggtaaaaccagaaatccctagatgtaaatccgaggaactccaagggaccgatgacgaagatgaagat gaaaataaatcatttgggacatggaggcatcgcctttatagaagaagaactcggaaaaagagaagaccactgactgagcg accaccagaaaagtacaaaaataactacgaaatggaaaaacaactagagaagacacttcctggttatcacaacgtcagag agaggcttggagtgatagattacgatacaattatagatgattatcgatcccgaatagttagaaaccaagaaaatgacaaa cctgccaactctgttgatgaagatgctgaaaaagcagacagtataccaaaactacctcaaataaaaaagacatccaaagg tgcctatttggctgcaacaacaagccgtagtaacagacgaagatctagtgtaagatctgaggagagtatacacgacgaac tggctaggaaacagctagaactctattttgactacatagcagaattacagaaatcaatggctacgcaagaggaagggagg aagacgataggtaatgaatttgacaatcgtcccccatcaagagtgaccctgacagaggccgacattcacccaatgtttat tctggtccaagtgcttgagaaaggacaatactttggtattgccaatatgatataccctgatcaacctagcgtgtctgtga taagcaatggtgctgaatgtatcatgatctcaaagaagtttttcatggaaaagaaaactgaaacaaccatgagaaatatt caccattatctgatactgacagagagaaagaaagccaacaaagaacggcctaaaagattttacagcgaattgtatggacc ctctaccctacgttggaagtctagagttagggcttag |
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| Transcript ID | pfu_aug2.0_1421.1_05038.t2 |
| Definition | - |
>pfu_aug2.0_1421.1_05038.t2 atgggttcagttgaccgattgccccaagaagctcgacgtatactgcagacacgacaagaggccagaactgataaagaaat agcctatctacaaatcgttctacgaggaataaaagcgttcacagaatacccacaaaagatgcagcgacgactctgtcaag ttggttggtatgaggcatatgaaccaaggcgtgccattataagacagcatcacccacctcattcgttctactttatcctg agtggaacagtaatggtgacagcgtttgataaggacaacggagggaccaaactccttgtcagtttacataaaggcatgtc ttttggagagcttgccgttattactaaaagacgccgtcaggctaccgtcagcacacagacacccacagaacttctttgta tttcttccttggacttcgaggaaatcttcatgtctggaggagtaaaaaatgtgaatgatcctgatcacaatacatttcta ggatctgtgcgcttcttgagagattggccggtacatctcctggcggagaaccctcaagcatgcttgttccattattttaa ccgaggggaaatcttagtcagagacagtaacagatcggattggatttacatcgtaaaatcggggagtctctcagtcatga agaaattgagggaggtaaaaccagaaatccctagatgtaaatccgaggaactccaagggaccgatgacgaagatgaagat gaaaataaatcatttgggacatggaggcatcgcctttatagaagaagaactcggaaaaagagaagaccactgactgagcg accaccagaaaagtacaaaaataactacgaaatggaaaaacaactagagaagacacttcctggttatcacaacgtcagag agaggcttggagtgatagattacgatacaattatagatgattatcgatcccgaatagttagaaaccaagaaaatgacaaa cctgccaactctgttgatgaagatgctgaaaaagcagacagtataccaaaactacctcaaataaaaaagacatccaaagg tgcctatttggctgcaacaacaagccgtagtaacagacgaagatctagtgtaagatctgaggagagtatacacgacgaac tggctaggaaacagctagaattacagaaatcaatggctacgcaagaggaagggaggaagacgataggtaatgaatttgac aatcgtcccccatcaagagtgaccctgacagaggccgacattcacccaatgtttattctggtccaagtgcttgagaaagg acaatactttggtattgccaatatgatataccctgatcaacctagcgtgtctgtgataagcaatggtgctgaatgtatca tgatctcaaagaagtttttcatggaaaagaaaactgaaacaaccatgagaaatattcaccattatctgatactgacagag agaaagaaagccaacaaagaacggcctaaaagattttacagcgaattgtatggaccctctaccctacgttggaagtctag agttagggcttag |
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Protein
| Protein ID | pfu_aug2.0_1421.1_05038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1421.1_05038.t1 MGSVDRLPQEARRILQTRQEARTDKEIAYLQIVLRGIKAFTEYPQKMQRRLCQVGWYEAYEPRRAIIRQHHPPHSFYFIL SGTVMVTAFDKDNGGTKLLVSLHKGMSFGELAVITKRRRQATVSTQTPTELLCISSLDFEEIFMSGGVKNVNDPDHNTFL GSVRFLRDWPVHLLAENPQACLFHYFNRGEILVRDSNRSDWIYIVKSGSLSVMKKLREVKPEIPRCKSEELQGTDDEDED ENKSFGTWRHRLYRRRTRKKRRPLTERPPEKYKNNYEMEKQLEKTLPGYHNVRERLGVIDYDTIIDDYRSRIVRNQENDK PANSVDEDAEKADSIPKLPQIKKTSKGAYLAATTSRSNRRRSSVRSEESIHDELARKQLELYFDYIAELQKSMATQEEGR KTIGNEFDNRPPSRVTLTEADIHPMFILVQVLEKGQYFGIANMIYPDQPSVSVISNGAECIMISKKFFMEKKTETTMRNI HHYLILTERKKANKERPKRFYSELYGPSTLRWKSRVRA |
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| Protein ID | pfu_aug2.0_1421.1_05038.t2 |
| Definition | - |
>pfu_aug2.0_1421.1_05038.t2 MGSVDRLPQEARRILQTRQEARTDKEIAYLQIVLRGIKAFTEYPQKMQRRLCQVGWYEAYEPRRAIIRQHHPPHSFYFIL SGTVMVTAFDKDNGGTKLLVSLHKGMSFGELAVITKRRRQATVSTQTPTELLCISSLDFEEIFMSGGVKNVNDPDHNTFL GSVRFLRDWPVHLLAENPQACLFHYFNRGEILVRDSNRSDWIYIVKSGSLSVMKKLREVKPEIPRCKSEELQGTDDEDED ENKSFGTWRHRLYRRRTRKKRRPLTERPPEKYKNNYEMEKQLEKTLPGYHNVRERLGVIDYDTIIDDYRSRIVRNQENDK PANSVDEDAEKADSIPKLPQIKKTSKGAYLAATTSRSNRRRSSVRSEESIHDELARKQLELQKSMATQEEGRKTIGNEFD NRPPSRVTLTEADIHPMFILVQVLEKGQYFGIANMIYPDQPSVSVISNGAECIMISKKFFMEKKTETTMRNIHHYLILTE RKKANKERPKRFYSELYGPSTLRWKSRVRA |
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