Gene
| Gene Model ID | pfu_aug2.0_1422.1_08373 |
|---|---|
| Locus | scaffold1422.1 : 147516 ... 153020 : + |
| To GenomeBrowser | scaffold1422.1:147516..153020 |
| Genes list of scaffold | scaffold1422.1 |
| Synonym | pfu_aug1.0_16946.1_18411 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1422.1_08373.t1 | 2 | 1 | RVT_1 | 45 | 118 | 1.1e-06 | 28.1 | 3.6e-10 | 2.7e-06 | 26.9 |
| pfu_aug2.0_1422.1_08373.t1 | 2 | 2 | RVT_1 | 246 | 290 | 1.1e-06 | 28.1 | 0.51 | 3800.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1422.1_08373.t1 | gi|268571541|ref|XP_002641077.1| | Hypothetical protein CBG17454 [Caenorhabditis briggsae] | 6.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_1422.1_08373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1422.1_08373.t1 atggaggcaactcaaaaggagctttccaccacgcaaataagtaaaatggaggaaagtatgctcggtgctcatagatttaa acgccaaggaaacaaggcggtgtatcgtggtaacgctatgtgcacagtaggattcattttcaccaaagttgccaagtact tcgtgaaatatataagagagaaaggtcacaaactagttatgtatctagatgatgggttagctggaacatctgcagaatca gaagctagtaagctgagcgaagtaattcgaacagagctaaaggaattcggatttctgatagccattgaaaaatgttgttg gtcgccttctcaacaagcattgtggctaggtttgtgttgggatttcaaaacatgtaaagttagaatatcagaggatagaa taggcagattcctcgccttgatgagagatttgttacagcgggtatgtcaaggacaatctttagtgagtgttaaactttta catgtggcatgtatagccggtcagacaataagcttcgtgacagagctacatatggcacagttagatctactcagacaaca gggtcagggaactattaatagatctgtaatcagtgggtcatggagtgatgacgagagagtgaaaagttctacatggaggg aacttgatgctctaaacagggttattcagaacaatgaagagaaacgggaagggaagagaatcggtgtagttagcgacaat aaaaatatagatttagacagggtgatgaggtgttaccaggctgatggtgtgttcatatctcagttgatacgctatgccag agcaagtaccaaatatacagattttattctgagagctaggcgtctttcagataagcttctcagtcagggatacgtttgtg accgactagcgtcatcactgaggaagttctacggtcgatatggagaactcgtcatacatgtacactatgatgcccaactc tccagaatggtagatgatattctgtcatag |
|
Protein
| Protein ID | pfu_aug2.0_1422.1_08373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1422.1_08373.t1 MEATQKELSTTQISKMEESMLGAHRFKRQGNKAVYRGNAMCTVGFIFTKVAKYFVKYIREKGHKLVMYLDDGLAGTSAES EASKLSEVIRTELKEFGFLIAIEKCCWSPSQQALWLGLCWDFKTCKVRISEDRIGRFLALMRDLLQRVCQGQSLVSVKLL HVACIAGQTISFVTELHMAQLDLLRQQGQGTINRSVISGSWSDDERVKSSTWRELDALNRVIQNNEEKREGKRIGVVSDN KNIDLDRVMRCYQADGVFISQLIRYARASTKYTDFILRARRLSDKLLSQGYVCDRLASSLRKFYGRYGELVIHVHYDAQL SRMVDDILS |
|