Gene
| Gene Model ID | pfu_aug2.0_1427.1_24913 |
|---|---|
| Locus | scaffold1427.1 : 18293 ... 32865 : - |
| To GenomeBrowser | scaffold1427.1:18293..32865 |
| Genes list of scaffold | scaffold1427.1 |
| Synonym | pfu_aug1.0_9742.1_02790 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1427.1_24913.t2 | 2 | 1 | VWA | 5 | 116 | 0.0 | 175.4 | 5.2e-22 | 1.6e-18 | 67.0 |
| pfu_aug2.0_1427.1_24913.t2 | 2 | 1 | VWA_2 | 9 | 101 | 2.0e-20 | 73.6 | 4.0e-10 | 1.2e-06 | 28.7 |
| pfu_aug2.0_1427.1_24913.t2 | 2 | 1 | VWA_3 | 11 | 99 | 3.7e-10 | 39.6 | 1.9e-07 | 0.00056 | 19.6 |
| pfu_aug2.0_1427.1_24913.t2 | 2 | 1 | vWA-TerF-like | 15 | 89 | 4.8e-06 | 26.5 | 6.0e-05 | 0.18 | 11.6 |
| pfu_aug2.0_1427.1_24913.t2 | 2 | 2 | VWA_3 | 165 | 313 | 3.7e-10 | 39.6 | 7.0e-07 | 0.0021 | 17.7 |
| pfu_aug2.0_1427.1_24913.t2 | 2 | 2 | vWA-TerF-like | 165 | 306 | 4.8e-06 | 26.5 | 1.4e-05 | 0.041 | 13.6 |
| pfu_aug2.0_1427.1_24913.t2 | 2 | 2 | VWA | 166 | 334 | 0.0 | 175.4 | 4.3e-35 | 1.3e-31 | 109.7 |
| pfu_aug2.0_1427.1_24913.t2 | 2 | 2 | VWA_2 | 166 | 325 | 2.0e-20 | 73.6 | 1.5e-14 | 4.5e-11 | 43.1 |
Transcript
| Transcript ID | pfu_aug2.0_1427.1_24913.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1427.1_24913.t1 atgagaatccaatttggtgccgtgacccggaaggatgacttccaaagagaggtaaataggatcgattggaaaggtggcaa tacttataccaataaggctttagagatgatgtataatgcaatgaatgatggaaggaggaacagactgaaaatcgccgtgg tgatcactgatggaggatctacagatcccttttcattggaacagatagtcaagaaaatacacagcgatggatcgatccag atatttgctataggtgttggaaagagcataaacatcaaggaacttgaaatgatagcatctaacgccgtaagcgatcatct cttcatggttaatgacgtggacggattagcaatgttggactctatggtatccgctaaaatatgcccaaatgaaacaagac ccgcccctcctgcccgcccaaggccaactgttcgcccaagaccacttcgccaaagaccacaatatacatgttgccgcaac ggttttgatatttgtgtacaggatcctgcagatgtgatattcatcatcgacaaatcgtcaagtttaatgacggaaataaa cctacagaaggaactatcctttgttatgagcgtcattgaaaccctagatatcggaataggatctcgtcagacgagagttg gcgtgatttcgttcagcacagacgccatgttggaagtcgggcttgggaaatactcaagcaagagtgagctggagagagac ttactatatgtggagttttcaagaggcgacacttacacgcataaggcaatagacatcatgctggatgagtttgcgaatgc tagacgtaatgtaaaacggataggggttgtaataactgatggtggttccacggacccctacagccttaaggaccggctgg taaaagtacgaagtcagagaattactatgtttgcaataggtgttggagatgcagttaacccagaggagctctccgatatt ggtagtgaccctgatgaaacctacgtttcgcatgtagacaatctagacgctctgggaaaacttaacttagaattaggatt gaagagatgctctccagcatag |
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| Transcript ID | pfu_aug2.0_1427.1_24913.t2 |
| Definition | - |
>pfu_aug2.0_1427.1_24913.t2 atgagaatccaatttggtgccgtgacccggaaggatgacttccaaagagaggtaaataggatcgattggaaaggtggcaa tacttataccaataaggctttagagatgatgtataatgcaatgaatgatggaaggaggaacagactgaaaatcgccgtgg tgatcactgatggaggatctacagatcccttttcattggaacagatagtcaagaaaatacacagcgatggatcgatccag atatttgctataggtgttggaaagagcataaacatcaaggaacttgaaatgatagcatctaacgccgtaagcgatcatct cttcatggttaatgacgtggacggattagcaatgttggactctatggtatccgctaaaatatgcccaaatgaaacaagac ccgcccctcctgcccgcccaaggccaactgttcgcccaagaccacaatatacatgttgccgcaacggttttgatatttgt gtacaggatcctgcagatgtgatattcatcatcgacaaatcgtcaagtttaatgacggaaataaacctacagaaggaact atcctttgttatgagcgtcattgaaaccctagatatcggaataggatctcgtcagacgagagttggcgtgatttcgttca gcacagacgccatgttggaagtcgggcttgggaaatactcaagcaagagtgagctggagagagacttactatatgtggag ttttcaagaggcgacacttacacgcataaggcaatagacatcatgctggatgagtttgcgaatgctagacgtaatgtaaa acggataggggttgtaataactgatggtggttccacggacccctacagccttaaggaccggctggtaaaagtacgaagtc agagaattactatgtttgcaataggtgttggagatgcagttaacccagaggagctctccgatattggtagtgaccctgat gaaacctacgtttcgcatgtagacaatctagacgctctgggaaaacttaacttagaattaggattgaagagatgctctcc agcatag |
|
Protein
| Protein ID | pfu_aug2.0_1427.1_24913.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1427.1_24913.t1 MRIQFGAVTRKDDFQREVNRIDWKGGNTYTNKALEMMYNAMNDGRRNRLKIAVVITDGGSTDPFSLEQIVKKIHSDGSIQ IFAIGVGKSINIKELEMIASNAVSDHLFMVNDVDGLAMLDSMVSAKICPNETRPAPPARPRPTVRPRPLRQRPQYTCCRN GFDICVQDPADVIFIIDKSSSLMTEINLQKELSFVMSVIETLDIGIGSRQTRVGVISFSTDAMLEVGLGKYSSKSELERD LLYVEFSRGDTYTHKAIDIMLDEFANARRNVKRIGVVITDGGSTDPYSLKDRLVKVRSQRITMFAIGVGDAVNPEELSDI GSDPDETYVSHVDNLDALGKLNLELGLKRCSPA |
|
| Protein ID | pfu_aug2.0_1427.1_24913.t2 |
| Definition | - |
>pfu_aug2.0_1427.1_24913.t2 MRIQFGAVTRKDDFQREVNRIDWKGGNTYTNKALEMMYNAMNDGRRNRLKIAVVITDGGSTDPFSLEQIVKKIHSDGSIQ IFAIGVGKSINIKELEMIASNAVSDHLFMVNDVDGLAMLDSMVSAKICPNETRPAPPARPRPTVRPRPQYTCCRNGFDIC VQDPADVIFIIDKSSSLMTEINLQKELSFVMSVIETLDIGIGSRQTRVGVISFSTDAMLEVGLGKYSSKSELERDLLYVE FSRGDTYTHKAIDIMLDEFANARRNVKRIGVVITDGGSTDPYSLKDRLVKVRSQRITMFAIGVGDAVNPEELSDIGSDPD ETYVSHVDNLDALGKLNLELGLKRCSPA |
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