Gene
| Gene Model ID | pfu_aug2.0_1427.1_24915 |
|---|---|
| Locus | scaffold1427.1 : 98439 ... 100135 : - |
| To GenomeBrowser | scaffold1427.1:98439..100135 |
| Genes list of scaffold | scaffold1427.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1427.1_24915.t1 | 1 | 1 | Tmemb_185A | 11 | 114 | 1.6e-11 | 44.2 | 4.4e-15 | 2.2e-11 | 43.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1427.1_24915.t1 | gi|676486507|ref|XP_009063999.1| | hypothetical protein LOTGIDRAFT_195820 [Lottia gigantea] | 2.0e-35 |
| pfu_aug2.0_1427.1_24915.t1 | gi|749776207|ref|XP_011143114.1| | PREDICTED: transmembrane protein 60 [Harpegnathos saltator] | 2.0e-30 |
| pfu_aug2.0_1427.1_24915.t1 | gi|632947540|ref|XP_007889097.1| | PREDICTED: transmembrane protein 60 [Callorhinchus milii] | 4.0e-28 |
| pfu_aug2.0_1427.1_24915.t1 | gi|260828560|ref|XP_002609231.1| | hypothetical protein BRAFLDRAFT_125975 [Branchiostoma floridae] | 1.0e-27 |
| pfu_aug2.0_1427.1_24915.t1 | gi|602629521|ref|XP_007421687.1| | PREDICTED: transmembrane protein 60 [Python bivittatus] | 3.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_1427.1_24915.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1427.1_24915.t1 atggctgttctacacagagctttatttacatggtttatagtgcttgtattcctaatactgttagctttaaagctagatca taaagtcaactggaactggtttctcgtatttgtaccattgtggttatttgactctgttattgtgatttacatcgtgttta aaatgatcgtccattgtaaacacggatatgacagatcctcggatgtcagtatttctatgccacgaaaagccttttatctc caagctgtgactttaatgattctattccaagtgctgctttgtctgagacaacagaagtacattatagctgacttgcatta tgcaatgattccactttggttgctccttttggaaggtgtagttgacatttcggcaggtttattcagagtggctagaggat ga |
|
Protein
| Protein ID | pfu_aug2.0_1427.1_24915.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1427.1_24915.t1 MAVLHRALFTWFIVLVFLILLALKLDHKVNWNWFLVFVPLWLFDSVIVIYIVFKMIVHCKHGYDRSSDVSISMPRKAFYL QAVTLMILFQVLLCLRQQKYIIADLHYAMIPLWLLLLEGVVDISAGLFRVARG |
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