Gene
| Gene Model ID | pfu_aug2.0_1427.1_24918 |
|---|---|
| Locus | scaffold1427.1 : 153929 ... 158963 : - |
| To GenomeBrowser | scaffold1427.1:153929..158963 |
| Genes list of scaffold | scaffold1427.1 |
| Synonym | pfu_aug1.0_8874.1_02663 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna replication atp-dependent helicase nuclease dna2 | GO:0000076 GO:0000084 GO:0000722 GO:0000729 GO:0000737 GO:0003677 GO:0005515 GO:0005654 GO:0005760 GO:0006264 GO:0006284 GO:0016890 GO:0017108 GO:0032201 GO:0032508 GO:0042645 GO:0043137 GO:0043139 GO:0043142 GO:0043504 GO:0045740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1427.1_24918.t1 | 1 | 1 | AAA_12 | 16 | 149 | 1.6e-36 | 125.6 | 6.89999e-40 | 2.1e-36 | 125.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1427.1_24918.t1 | gi|20380180|gb|AAH28188.1| | DNA2 protein, partial [Homo sapiens] | 8.0e-39 |
| pfu_aug2.0_1427.1_24918.t1 | gi|704559821|ref|XP_010182369.1| | PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2, partial [Mesitornis unicolor] | 2.0e-38 |
| pfu_aug2.0_1427.1_24918.t1 | gi|532080539|ref|XP_005326027.1| | PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Ictidomys tridecemlineatus] | 5.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_1427.1_24918.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1427.1_24918.t1 gtattagatgaagaaccttggttaataccaatattaggagtagagacctataaagctgctgtttttatgaacacggaaca tattcctgctcaagaggaacgtgatcgtgctggacttatcaaaaatgttacggagagtcgtctggtatgctctgtcacac actcgtgtgtcaagtgtggtataaagcagagtgatataggagttatagccccttaccgtcaccaggtggcgctgataaag aatgacctgtggaatttcccggatgtagaagttaatacagtagatcagtatcagggtcgggacaaagatgtcattattat ttccttcaccagaagtttttccaactcaaacgaggcagagagcaagtctggacagctcctgaaagacgtcagaagattga atgtggctatcactcgtgctaagaaaaagctgattatgattggtgatatacatacacttaaacggtacggtcctcttaaa cagatcatagatatgatgggagacatgcaggcagtatccttttataaagcagaagtttttgaatga |
|
Protein
| Protein ID | pfu_aug2.0_1427.1_24918.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1427.1_24918.t1 VLDEEPWLIPILGVETYKAAVFMNTEHIPAQEERDRAGLIKNVTESRLVCSVTHSCVKCGIKQSDIGVIAPYRHQVALIK NDLWNFPDVEVNTVDQYQGRDKDVIIISFTRSFSNSNEAESKSGQLLKDVRRLNVAITRAKKKLIMIGDIHTLKRYGPLK QIIDMMGDMQAVSFYKAEVFE |
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