Gene
Gene Model ID | pfu_aug2.0_1429.1_31679 |
---|---|
Locus | scaffold1429.1 : 22053 ... 44015 : - |
To GenomeBrowser | scaffold1429.1:22053..44015 |
Genes list of scaffold | scaffold1429.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1429.1_31679.t1 | 1 | 1 | MAM | 27 | 167 | 2.5e-17 | 63.0 | 3.2e-21 | 4.7e-17 | 62.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1429.1_31679.t1 | gi|108742032|gb|AAI17650.1| | Wu:fb63a08 protein [Danio rerio] | 4.0e-14 |
pfu_aug2.0_1429.1_31679.t1 | gi|551622214|ref|XP_005791495.1| | hypothetical protein EMIHUDRAFT_109089 [Emiliania huxleyi CCMP1516] | 6.0e-14 |
pfu_aug2.0_1429.1_31679.t1 | gi|146218543|gb|AAI39855.1| | Wu:fb63a08 protein [Danio rerio] | 7.0e-14 |
pfu_aug2.0_1429.1_31679.t1 | gi|617449378|ref|XP_007568042.1| | PREDICTED: zonadhesin-like isoform X2 [Poecilia formosa] | 4.0e-13 |
Transcript
Transcript ID | pfu_aug2.0_1429.1_31679.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1429.1_31679.t1 atgctgttaaaacgggagtttgttagtttcgttctacatgtagtaattatcaagattccgaacacagttcagcaatcctg tgactttgaaagtgacacagacagcttttgtaattggaacagcacgggatggacacgcactttgtatgcttcggaatcgt ctttaacgggaccttcacgcgcaaaacaaggagattattatatctacacgaaatggaatgcctcctttcaccaggctgta ttacgcatacctgtcagttctccacagtgcttattgttctggtatcatatgtatggtagcaacattgctaacctgaccgt tatggaggggaaccagactatctggatcaaagctggtgatcaaaatcaagactggcactgtggccgagttagcatcaaag atttgataaaagaagtcgctattgaagcacagaagggttcagatttacataatatcattgctttggaccatgtgcagctt atctcatatataccatgtgaatcattagaatgtaactatgatgcatcaacacaacatcaacaaccatcttctcacaccat tggggaaatagatgcaacaactttgcgatccagtcacgtggccatcactactgttgcatttgaaaaatctactacatggt tttcgcgtaaattaattccaggaaaaatacagaaaaatcagccaccatggataacctgcaaaaccaagaaaggattcagc ggccgttgtcagggagatacaatgctgatccaatag |
Protein
Protein ID | pfu_aug2.0_1429.1_31679.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1429.1_31679.t1 MLLKREFVSFVLHVVIIKIPNTVQQSCDFESDTDSFCNWNSTGWTRTLYASESSLTGPSRAKQGDYYIYTKWNASFHQAV LRIPVSSPQCLLFWYHMYGSNIANLTVMEGNQTIWIKAGDQNQDWHCGRVSIKDLIKEVAIEAQKGSDLHNIIALDHVQL ISYIPCESLECNYDASTQHQQPSSHTIGEIDATTLRSSHVAITTVAFEKSTTWFSRKLIPGKIQKNQPPWITCKTKKGFS GRCQGDTMLIQ |