Gene
| Gene Model ID | pfu_aug2.0_1429.1_31682 |
|---|---|
| Locus | scaffold1429.1 : 95426 ... 106543 : + |
| To GenomeBrowser | scaffold1429.1:95426..106543 |
| Genes list of scaffold | scaffold1429.1 |
| Synonym | pfu_aug1.0_17471.1_25608 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1429.1_31682.t1 | 2 | 1 | fn3 | 8 | 90 | 2.7e-09 | 37.0 | 4.2e-11 | 6.2e-07 | 29.4 |
| pfu_aug2.0_1429.1_31682.t1 | 2 | 2 | fn3 | 109 | 131 | 2.7e-09 | 37.0 | 0.0018 | 27.0 | 4.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1429.1_31682.t1 | gi|195444008|ref|XP_002069676.1| | GK11449 [Drosophila willistoni] | 5.0e-08 |
| pfu_aug2.0_1429.1_31682.t1 | gi|156351500|ref|XP_001622540.1| | hypothetical protein NEMVEDRAFT_v1g248399 [Nematostella vectensis] | 1.0e-07 |
| pfu_aug2.0_1429.1_31682.t1 | gi|746833828|ref|XP_011065559.1| | PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 isoform X1 [Acromyrmex echinatior] | 3.0e-07 |
| pfu_aug2.0_1429.1_31682.t1 | gi|746833830|ref|XP_011065567.1| | PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 isoform X2 [Acromyrmex echinatior] | 3.0e-07 |
| pfu_aug2.0_1429.1_31682.t1 | gi|746833832|ref|XP_011065577.1| | PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 isoform X3 [Acromyrmex echinatior] | 3.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1429.1_31682.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1429.1_31682.t1 atgattgacttttttatcacagacgagcctaccaaccttgtgtgcacaccaaagaattccacaatcctagagttcacatg gactctgccggcaggtggcgctggtgtcgtccaagggtatcatctggatttagtccgaacagacaatgtcaagatagaca tcctaccgacggtgaccattaatggttactatgtagatacatacacattctacggtctgggtaaatatgcggagtataca ctcactatgcactccttcactgcttccggaaatcaagctgacgtcacatccgtttgtaggacgctggaagacattccaga tggtgctcctagcggtgtaaacgcaacaggtatttcatactctgaaatatacgtagaatggttagaactggaggatttct acagaaacggagtactagcgggattgatcaccaatgctccagctgatggtaaggtgttcatgaaaacggaagaggtggtc cgaacacgtaatatctaccatggaatgggaggccccagtatcatcaaggtcaaaatgatgaactttaaacgccgagtcag ggataagaaaaattctgtatcacctcatgatgaagatgagggcttctgtgatgacgaagaagatggcggtcagaggaaca agggagatgtgacagctcgagacatccacatgacagaagacaatgagctcaagagagaaactccgcctccagctaaaatc cctgttttgtcgaaacgtatggctagagaaccgtccagttttgaccttgaaatgggaaacactgaagatccaattcaagg tgtacaggataaagttacagctgaaaacgagaccggaaacggtggtggaaaatctggaaagggtaacggtattccgaaac cgtttatccccgggccggatgatgacgaagtgtttgatgagaatctggatccggaattatatcccggaaaagctccagat tttaccatgttacgaaacggtgacggattcttttag |
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Protein
| Protein ID | pfu_aug2.0_1429.1_31682.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1429.1_31682.t1 MIDFFITDEPTNLVCTPKNSTILEFTWTLPAGGAGVVQGYHLDLVRTDNVKIDILPTVTINGYYVDTYTFYGLGKYAEYT LTMHSFTASGNQADVTSVCRTLEDIPDGAPSGVNATGISYSEIYVEWLELEDFYRNGVLAGLITNAPADGKVFMKTEEVV RTRNIYHGMGGPSIIKVKMMNFKRRVRDKKNSVSPHDEDEGFCDDEEDGGQRNKGDVTARDIHMTEDNELKRETPPPAKI PVLSKRMAREPSSFDLEMGNTEDPIQGVQDKVTAENETGNGGGKSGKGNGIPKPFIPGPDDDEVFDENLDPELYPGKAPD FTMLRNGDGFF |
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