Gene
| Gene Model ID | pfu_aug2.0_1429.1_31683 |
|---|---|
| Locus | scaffold1429.1 : 107675 ... 114355 : - |
| To GenomeBrowser | scaffold1429.1:107675..114355 |
| Genes list of scaffold | scaffold1429.1 |
| Synonym | pfu_aug1.0_17471.1_25607 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1429.1_31683.t1 | 2 | 1 | Kazal_1 | 140 | 182 | 3.7e-12 | 46.0 | 2.8e-11 | 8.3e-08 | 32.1 |
| pfu_aug2.0_1429.1_31683.t1 | 2 | 1 | Kazal_2 | 142 | 182 | 6.6e-13 | 48.3 | 3.6e-12 | 1.1e-08 | 34.9 |
| pfu_aug2.0_1429.1_31683.t1 | 2 | 2 | Kazal_1 | 237 | 278 | 3.7e-12 | 46.0 | 3.1e-07 | 0.0009 | 19.2 |
| pfu_aug2.0_1429.1_31683.t1 | 2 | 2 | Kazal_2 | 238 | 272 | 6.6e-13 | 48.3 | 3.4e-07 | 0.001 | 18.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1429.1_31683.t1 | gi|551522374|ref|XP_005812676.1| | PREDICTED: tomoregulin-1-like [Xiphophorus maculatus] | 4.0e-07 |
| pfu_aug2.0_1429.1_31683.t1 | gi|742090028|ref|XP_010890777.1| | PREDICTED: tomoregulin-1 [Esox lucius] | 1.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1429.1_31683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1429.1_31683.t1 atgaaagtcaaacacgagacccggaatcagattccaaaattcattttcaaaaggcctacaaattttggaaaaaataacaa aacaaaaccattgacaagaaaagaaaacaaaatggtcaaacaggcggagacaatacatgtaacacagcgccgtagaaaga cgaaggacatcattaagtatactaagttagtttgcaccagtattaagaacagaaaacaaaaccgatggccttttcataat gttgaatgtgaagaactcacgattttcttatctttactttacacgtatactactagatcaggatctgaagaaggtcggtg caataaaatgaattggttggcaattatttcacttctagcgcttgcaggtacggtatctgcccaattcgacacatattatt gtaagtatgtgcaacgtataaactgtgctaataaacagaaggaagagacatgtggttccgatggaaagacatatcgtact tcatgtgacttatcccaagctttctgtagaaaccagaggatacacaaacagcatgacgggccatgtaggtcaacttcaac aacaacgaaaacggcaacaatgaccaaaccaactgacgccccaaaggcaacaacagccacaacgatgcctatgccaacca ccacgatgaaatttgtaaatggttctgaaattgctttcgacattttttgtcttgatctcttccatcatgactgttctggt gagccagataacaaactatgcgcagacgacaacatgacctacaggaatctgtgcgagtacgagaagaggaaatgccttca ccgacacatgcagatacagtatatgggcgactgtaaataa |
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Protein
| Protein ID | pfu_aug2.0_1429.1_31683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1429.1_31683.t1 MKVKHETRNQIPKFIFKRPTNFGKNNKTKPLTRKENKMVKQAETIHVTQRRRKTKDIIKYTKLVCTSIKNRKQNRWPFHN VECEELTIFLSLLYTYTTRSGSEEGRCNKMNWLAIISLLALAGTVSAQFDTYYCKYVQRINCANKQKEETCGSDGKTYRT SCDLSQAFCRNQRIHKQHDGPCRSTSTTTKTATMTKPTDAPKATTATTMPMPTTTMKFVNGSEIAFDIFCLDLFHHDCSG EPDNKLCADDNMTYRNLCEYEKRKCLHRHMQIQYMGDCK |
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