Gene
| Gene Model ID | pfu_aug2.0_1429.1_31684 |
|---|---|
| Locus | scaffold1429.1 : 116906 ... 125816 : + |
| To GenomeBrowser | scaffold1429.1:116906..125816 |
| Genes list of scaffold | scaffold1429.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1429.1_31684.t1 | 3 | 1 | Kazal_2 | 6 | 11 | 1.3e-11 | 44.2 | 2.0 | 10000.0 | -3.5 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 1 | Lectin_C | 27 | 50 | 1.6e-06 | 28.7 | 0.72 | 3500.0 | -1.4 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 1 | Kazal_1 | 35 | 76 | 2.7e-13 | 49.6 | 1.3e-09 | 6.5e-06 | 26.0 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 2 | Kazal_2 | 42 | 76 | 1.3e-11 | 44.2 | 3.0e-10 | 1.5e-06 | 28.0 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 2 | Lectin_C | 59 | 72 | 1.6e-06 | 28.7 | 0.74 | 3700.0 | -1.4 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 2 | Kazal_1 | 100 | 131 | 2.7e-13 | 49.6 | 4.4e-11 | 2.2e-07 | 30.7 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 3 | Kazal_2 | 103 | 129 | 1.3e-11 | 44.2 | 2.7e-09 | 1.4e-05 | 24.9 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 3 | Lectin_C | 142 | 221 | 1.6e-06 | 28.7 | 3.2e-10 | 1.6e-06 | 28.7 |
| pfu_aug2.0_1429.1_31684.t1 | 3 | 3 | Kazal_1 | 211 | 221 | 2.7e-13 | 49.6 | 0.093 | 460.0 | 0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1429.1_31684.t1 | gi|673048867|ref|XP_008878394.1| | hypothetical protein H310_12906 [Aphanomyces invadans] | 8.0e-11 |
| pfu_aug2.0_1429.1_31684.t1 | gi|698803062|ref|XP_009834560.1| | hypothetical protein H257_09879 [Aphanomyces astaci] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_1429.1_31684.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1429.1_31684.t1 atgactaaaggagtatgcgccctgctttgtgccttagtacttttggcctggacgcagaacgtgaggagttttgattggta ttgcagttatctgatccacactcaatgtcttaataaacctaaagatcaacaatgtggaagtaacaactatacatactaca ataaatgtgagttttcgcaagaccattgtaggaacaggaacatccatcttgctcataacggtacatgtcacgggacgagc catcttagtagtatgacccacggagctgatgtaatattccagaccatgtgtgcctcacttatctcatgtccctatgactt caatcaaatatgtgcttccgatggaaagacatatgccaatgaatgcgagtatgaaatgaaaagatgcatgcaccctgaaa tgtacattgttgccagacaaccatgcgacaggaatccagaattttcagtttggattggaatacattatgccgaaaaggag ggtaaatggatgatcttcccggacatgatcctgatcgggaaaactttctccgattgggcaccgtatcaaccatcttgggt ttacaacggtggtagggaagaatgcggatctctgagggattattatgattttcagtggaacgatgtgtactgttcgagaa attatccatttatctgtgagcagaatttgagcagtaattag |
|
Protein
| Protein ID | pfu_aug2.0_1429.1_31684.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1429.1_31684.t1 MTKGVCALLCALVLLAWTQNVRSFDWYCSYLIHTQCLNKPKDQQCGSNNYTYYNKCEFSQDHCRNRNIHLAHNGTCHGTS HLSSMTHGADVIFQTMCASLISCPYDFNQICASDGKTYANECEYEMKRCMHPEMYIVARQPCDRNPEFSVWIGIHYAEKE GKWMIFPDMILIGKTFSDWAPYQPSWVYNGGREECGSLRDYYDFQWNDVYCSRNYPFICEQNLSSN |
|